XRN2 5'-3' exoribonuclease 2 [Gallus gallus (chicken)] - Gene

Summary

Symbol: XRN2provided by CGNC
Full Name: 5'-3' exoribonuclease 2provided by CGNC
Primary source: CGNC:6344
See related: Ensembl:ENSGALG00010018148
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 30

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	3	NC_052534.1 (3725107..3770326, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	3	NC_052575.1 (3648475..3693657, complement)

Chromosome 3 - NC_052534.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables 5'-3' RNA exonuclease activity	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in nuclear-transcribed mRNA catabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: 5'-3' exoribonuclease 2

NP_001026204.1

EC 3.1.13.-

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001031033.2 → NP_001026204.1 5'-3' exoribonuclease 2

See identical proteins and their annotated locations for NP_001026204.1

Status: PROVISIONAL

Source sequence(s)

JAENSK010000060

UniProtKB/Swiss-Prot

Q5ZIP4

UniProtKB/TrEMBL

A0A8V0Z4P5

Related

ENSGALP00010026092.1, ENSGALT00010043875.1

Conserved Domains (2) summary

COG5049
Location:1 → 786

XRN1; 5'-3' exonuclease [Replication, recombination and repair]

pfam03159
Location:1 → 253

XRN_N; XRN 5'-3' exonuclease N-terminus

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

3725107..3770326 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)