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    OVOL3 ovo like zinc finger 3 [ Gallus gallus (chicken) ]

    Gene ID: 416720, updated on 17-Aug-2024

    Summary

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    Symbol
    OVOL3provided by CGNC
    Full Name
    ovo like zinc finger 3provided by CGNC
    Primary source
    CGNC:6606
    See related
    Ensembl:ENSGALG00010018668
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    OVOL2
    Orthologs
    human mouse all
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    Genomic context

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    See OVOL3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (15146976..15154079)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (15054111..15068338)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene lysine acetyltransferase 14 Neighboring gene protein PET117 homolog, mitochondrial Neighboring gene uncharacterized LOC107052871 Neighboring gene mitochondrial genome maintenance exonuclease 1 Neighboring gene sorting nexin 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The zinc finger transcription factor Ovol2 acts downstream of the bone morphogenetic protein pathway to regulate the cell fate decision between neuroectoderm and mesendoderm. Zhang T, et al. J Biol Chem, 2013 Mar 1. PMID 23319585, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Ovol2 acts downstream of the BMP pathway in the cell fate decision between neuroectoderm and mesendoderm to ensure proper germ layer development.
      Title: The zinc finger transcription factor Ovol2 acts downstream of the bone morphogenetic protein pathway to regulate the cell fate decision between neuroectoderm and mesendoderm.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in epidermal cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor Ovo-like 2
    Names
    ovo like zinc finger 2
    ovo-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      15146976..15154079
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_415018.8 → XP_415018.5  transcription factor Ovo-like 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z737
      Related
      ENSGALP00010026960.1, ENSGALT00010045139.1
      Conserved Domains (3) summary
      COG5048
      Location:107 → 159
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:160 → 209
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:110 → 130
      ZF_C2H2; C2H2 Zn finger [structural motif]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      15054111..15068338
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040668049.2 → XP_040523983.2  transcription factor Ovo-like 2 isoform X2

    2. XM_046915042.1 → XP_046770998.1  transcription factor Ovo-like 2 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials