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    RABGAP1L RAB GTPase activating protein 1 like [ Gallus gallus (chicken) ]

    Gene ID: 424438, updated on 3-Dec-2024

    Summary

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    Symbol
    RABGAP1Lprovided by CGNC
    Full Name
    RAB GTPase activating protein 1 likeprovided by CGNC
    Primary source
    CGNC:52194
    See related
    Ensembl:ENSGALG00010011161 Ensembl:ENSGALG00010014886
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RABGAP1L in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    39
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (7108458..7325001, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (7119880..7336950, complement)

    Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene tenascin N Neighboring gene mitochondrial ribosomal protein S14 Neighboring gene calcyclin binding protein Neighboring gene uncharacterized LOC121111367 Neighboring gene G protein-coupled receptor 52 Neighboring gene ring finger and CCCH-type domains 1 Neighboring gene serpin family C member 1 Neighboring gene zinc finger and BTB domain containing 37

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    rab GTPase-activating protein 1-like
    Names
    expressed in hematopoietic cells, heart, liver

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001012923.3 → NP_001012941.3  rab GTPase-activating protein 1-like isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000237
      UniProtKB/Swiss-Prot
      Q5ZJ17
      Related
      ENSGALP00010020771.1, ENSGALT00010035817.1
      Conserved Domains (2) summary
      smart00164
      Location:536 → 745
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      cd01211
      Location:128 → 256
      PTB_Rab6GAP; GTPase activating protein for Rab 6 Phosphotyrosine-binding (PTB) domain

    2. NM_001389346.2 → NP_001376275.2  rab GTPase-activating protein 1-like isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000237
      Conserved Domains (3) summary
      smart00164
      Location:535 → 744
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      COG1196
      Location:768 → 1019
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01211
      Location:127 → 255
      PTB_Rab6GAP; GTPase activating protein for Rab 6 Phosphotyrosine-binding (PTB) domain

    3. NM_001389347.2 → NP_001376276.2  rab GTPase-activating protein 1-like isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000237
      Conserved Domains (3) summary
      smart00164
      Location:536 → 745
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      COG1196
      Location:769 → 1020
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01211
      Location:128 → 256
      PTB_Rab6GAP; GTPase activating protein for Rab 6 Phosphotyrosine-binding (PTB) domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7108458..7325001 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046944410.1 → XP_046800366.1  rab GTPase-activating protein 1-like isoform X1

    2. XM_040704568.2 → XP_040560502.1  rab GTPase-activating protein 1-like isoform X1

      Conserved Domains (3) summary
      smart00164
      Location:536 → 745
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      COG1196
      Location:769 → 1020
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01211
      Location:128 → 256
      PTB_Rab6GAP; GTPase activating protein for Rab 6 Phosphotyrosine-binding (PTB) domain

    3. XM_046944409.1 → XP_046800365.1  rab GTPase-activating protein 1-like isoform X1

    4. XM_046944411.1 → XP_046800367.1  rab GTPase-activating protein 1-like isoform X1

    5. XM_040704569.2 → XP_040560503.1  rab GTPase-activating protein 1-like isoform X2

      Conserved Domains (2) summary
      COG1196
      Location:209 → 460
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam00566
      Location:19 → 185
      RabGAP-TBC; Rab-GTPase-TBC domain

    6. XM_046944413.1 → XP_046800369.1  rab GTPase-activating protein 1-like isoform X5

      UniProtKB/TrEMBL
      A0A8V0YGT4

    7. XM_015290304.4 → XP_015145790.2  rab GTPase-activating protein 1-like isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y3N7
      Related
      ENSGALP00010015229.1, ENSGALT00010026697.1
      Conserved Domains (1) summary
      COG1196
      Location:87 → 338
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    8. XM_046944418.1 → XP_046800374.1  rab GTPase-activating protein 1-like isoform X9

      UniProtKB/TrEMBL
      A0A8V0YGT4

    9. XM_040704570.2 → XP_040560504.1  rab GTPase-activating protein 1-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0YGT4
      Conserved Domains (1) summary
      COG1196
      Location:17 → 225
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    10. XM_046944412.1 → XP_046800368.1  rab GTPase-activating protein 1-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0YGT4
      Related
      ENSGALP00010015220.1, ENSGALT00010026683.1
      Conserved Domains (1) summary
      COG1196
      Location:17 → 225
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    11. XM_040704571.2 → XP_040560505.1  rab GTPase-activating protein 1-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0YGT4
      Conserved Domains (1) summary
      COG1196
      Location:17 → 225
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    12. XM_046944419.1 → XP_046800375.1  rab GTPase-activating protein 1-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0YGT4
      Conserved Domains (1) summary
      COG1196
      Location:17 → 225
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    13. XM_046944417.1 → XP_046800373.1  rab GTPase-activating protein 1-like isoform X8

      UniProtKB/TrEMBL
      A0A8V0YC48

    14. XM_015290305.4 → XP_015145791.2  rab GTPase-activating protein 1-like isoform X6

      UniProtKB/TrEMBL
      A0A8V0YC48
      Related
      ENSGALP00010015222.1, ENSGALT00010026686.1
      Conserved Domains (1) summary
      COG1196
      Location:41 → 276
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    15. XM_046944415.1 → XP_046800371.1  rab GTPase-activating protein 1-like isoform X6

      UniProtKB/TrEMBL
      A0A8V0YC48
      Related
      ENSGALP00010015225.1, ENSGALT00010026692.1

    16. XM_046944416.1 → XP_046800372.1  rab GTPase-activating protein 1-like isoform X7

      UniProtKB/TrEMBL
      A0A8V0YGT4

    17. XM_004943266.5 → XP_004943323.2  rab GTPase-activating protein 1-like isoform X10

      UniProtKB/TrEMBL
      A0A8V0YGT4
      Conserved Domains (1) summary
      COG1196
      Location:14 → 222
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    18. XM_040704573.2 → XP_040560507.1  rab GTPase-activating protein 1-like isoform X11

    19. XM_025152821.3 → XP_025008589.1  rab GTPase-activating protein 1-like isoform X12

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7119880..7336950 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046922579.1 → XP_046778535.1  rab GTPase-activating protein 1-like isoform X1

    2. XM_046922577.1 → XP_046778533.1  rab GTPase-activating protein 1-like isoform X1

    3. XM_046922578.1 → XP_046778534.1  rab GTPase-activating protein 1-like isoform X1

    4. XM_046922580.1 → XP_046778536.1  rab GTPase-activating protein 1-like isoform X1

    5. XM_046922581.1 → XP_046778537.1  rab GTPase-activating protein 1-like isoform X2

    6. XM_046922584.1 → XP_046778540.1  rab GTPase-activating protein 1-like isoform X13

    7. XM_046922583.1 → XP_046778539.1  rab GTPase-activating protein 1-like isoform X13

    8. XM_046922587.1 → XP_046778543.1  rab GTPase-activating protein 1-like isoform X5

      UniProtKB/TrEMBL
      A0A8V0YGT4

    9. XM_046922585.1 → XP_046778541.1  rab GTPase-activating protein 1-like isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y3N7

    10. XM_046922592.1 → XP_046778548.1  rab GTPase-activating protein 1-like isoform X9

      UniProtKB/TrEMBL
      A0A8V0YGT4

    11. XM_046922595.1 → XP_046778551.1  rab GTPase-activating protein 1-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0YGT4
      Conserved Domains (1) summary
      COG1196
      Location:17 → 225
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    12. XM_046922586.1 → XP_046778542.1  rab GTPase-activating protein 1-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0YGT4
      Conserved Domains (1) summary
      COG1196
      Location:17 → 225
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    13. XM_046922596.1 → XP_046778552.1  rab GTPase-activating protein 1-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0YGT4
      Conserved Domains (1) summary
      COG1196
      Location:17 → 225
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    14. XM_046922597.1 → XP_046778553.1  rab GTPase-activating protein 1-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0YGT4
      Conserved Domains (1) summary
      COG1196
      Location:17 → 225
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    15. XM_046922591.1 → XP_046778547.1  rab GTPase-activating protein 1-like isoform X8

      UniProtKB/TrEMBL
      A0A8V0YC48

    16. XM_046922588.1 → XP_046778544.1  rab GTPase-activating protein 1-like isoform X6

      UniProtKB/TrEMBL
      A0A8V0YC48

    17. XM_046922589.1 → XP_046778545.1  rab GTPase-activating protein 1-like isoform X6

      UniProtKB/TrEMBL
      A0A8V0YC48

    18. XM_046922590.1 → XP_046778546.1  rab GTPase-activating protein 1-like isoform X7

      UniProtKB/TrEMBL
      A0A8V0YGT4

    19. XM_046922594.1 → XP_046778550.1  rab GTPase-activating protein 1-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0YGT4
      Conserved Domains (1) summary
      COG1196
      Location:17 → 225
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    20. XM_046922598.1 → XP_046778554.1  rab GTPase-activating protein 1-like isoform X10

      UniProtKB/TrEMBL
      A0A8V0YGT4

    21. XM_046922599.1 → XP_046778555.1  rab GTPase-activating protein 1-like isoform X11

    22. XM_046922600.1 → XP_046778556.1  rab GTPase-activating protein 1-like isoform X12

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZJ17.1 GenPept UniProtKB/Swiss-Prot:Q5ZJ17

    Gene LinkOut

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    Research Materials