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    VEZF1 vascular endothelial zinc finger 1 [ Gallus gallus (chicken) ]

    Gene ID: 417664, updated on 3-Dec-2024

    Summary

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    Symbol
    VEZF1provided by CGNC
    Full Name
    vascular endothelial zinc finger 1provided by CGNC
    Primary source
    CGNC:4119
    See related
    Ensembl:ENSGALG00010029505
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    BGP1
    Orthologs
    human mouse all
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    Genomic context

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    See VEZF1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (9194082..9217036)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (8931113..8954070)

    Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene dynein light chain LC8-type 2 Neighboring gene uncharacterized LOC121107288 Neighboring gene serine and arginine rich splicing factor 1 Neighboring gene uncharacterized LOC124417318 Neighboring gene CUE domain containing 1 Neighboring gene mitochondrial ribosomal protein S23

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. VEZF1 elements mediate protection from DNA methylation. Dickson J, et al. PLoS Genet, 2010 Jan. PMID 20062523, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vascular endothelial zinc finger 1
    Names
    beta globin protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037827.2 → NP_001032916.2  vascular endothelial zinc finger 1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000323
      UniProtKB/TrEMBL
      F1NQY0, I6LDD9
      Related
      ENSGALP00010044019.1, ENSGALT00010071328.1
      Conserved Domains (2) summary
      COG5189
      Location:199 → 256
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:177 → 197
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      9194082..9217036
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040650099.2 → XP_040506033.1  vascular endothelial zinc finger 1 isoform X5

      Conserved Domains (2) summary
      COG5189
      Location:87 → 151
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:65 → 85
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_046902416.1 → XP_046758372.1  vascular endothelial zinc finger 1 isoform X5

    3. XM_040650097.2 → XP_040506031.1  vascular endothelial zinc finger 1 isoform X1

      UniProtKB/TrEMBL
      I6LDD9
      Conserved Domains (2) summary
      COG5189
      Location:199 → 263
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:177 → 197
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_040650098.2 → XP_040506032.1  vascular endothelial zinc finger 1 isoform X2

      UniProtKB/TrEMBL
      I6LDD9
      Conserved Domains (2) summary
      COG5189
      Location:199 → 263
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:177 → 197
      ZF_C2H2; C2H2 Zn finger [structural motif]

    5. XM_015295801.4 → XP_015151287.1  vascular endothelial zinc finger 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V1AKI6, I6LDD9
      Related
      ENSGALP00010044018.1, ENSGALT00010071327.1
      Conserved Domains (2) summary
      sd00017
      Location:177 → 197
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:189 → 214
      zf-H2C2_2; Zinc-finger double domain

    6. XM_025141976.3 → XP_024997744.1  vascular endothelial zinc finger 1 isoform X4

      Conserved Domains (2) summary
      COG5189
      Location:199 → 256
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:177 → 197
      ZF_C2H2; C2H2 Zn finger [structural motif]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8931113..8954070
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046930158.1 → XP_046786114.1  vascular endothelial zinc finger 1 isoform X5

    2. XM_046930159.1 → XP_046786115.1  vascular endothelial zinc finger 1 isoform X5

    3. XM_046930153.1 → XP_046786109.1  vascular endothelial zinc finger 1 isoform X1

      UniProtKB/TrEMBL
      I6LDD9

    4. XM_046930154.1 → XP_046786110.1  vascular endothelial zinc finger 1 isoform X2

      UniProtKB/TrEMBL
      I6LDD9

    5. XM_046930155.1 → XP_046786111.1  vascular endothelial zinc finger 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V1AKI6, I6LDD9

    6. XM_046930157.1 → XP_046786113.1  vascular endothelial zinc finger 1 isoform X4

    Nucleotide Protein Strain
    Heading Accession and Version

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