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    USP6 ubiquitin specific peptidase 6 [ Gallus gallus (chicken) ]

    Gene ID: 417646, updated on 17-Aug-2024

    Summary

    Symbol
    USP6provided by CGNC
    Full Name
    ubiquitin specific peptidase 6provided by CGNC
    Primary source
    CGNC:50565
    See related
    Ensembl:ENSGALG00010029167
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    USP32
    Orthologs
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    Try the new Transcript table

    Genomic context

    See USP6 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    36
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (8507327..8567487)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (8244170..8304387)

    Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein binding protein 2 Neighboring gene C17orf64 homolog Neighboring gene microRNA mir-12236 Neighboring gene lysophosphatidic acid receptor 1-B-like Neighboring gene carbonic anhydrase 4 Neighboring gene zinc finger HIT-type containing 3

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    ubiquitin carboxyl-terminal hydrolase 32
    Names
    ubiquitin specific peptidase 32
    XP_004946797.3
    XP_040506460.1
    XP_040506461.1
    XP_040506462.1
    XP_040543565.1
    XP_040543566.1
    XP_040543568.1
    XP_040543569.1
    XP_040543570.1
    XP_046758657.1
    XP_046786348.1
    XP_415892.5

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      8507327..8567487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040650526.2XP_040506460.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X1

      Conserved Domains (3) summary
      COG5126
      Location:199363
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      COG5560
      Location:5421356
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cl02553
      Location:15271609
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    2. XM_040650527.2XP_040506461.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X2

      Conserved Domains (3) summary
      COG5126
      Location:199363
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      COG5560
      Location:5421342
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cl02553
      Location:15131595
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    3. XM_040650528.2XP_040506462.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X6

      Conserved Domains (3) summary
      COG5126
      Location:199363
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      COG5560
      Location:4931307
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cl02553
      Location:14781560
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    4. XM_004946740.4XP_004946797.3  ubiquitin carboxyl-terminal hydrolase 32 isoform X3

      UniProtKB/TrEMBL
      A0A8V1AGD6
      Related
      ENSGALP00010043176.1, ENSGALT00010070485.1
      Conserved Domains (3) summary
      COG5126
      Location:189339
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      COG5560
      Location:5181332
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cl02553
      Location:15031585
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    5. XM_415892.6XP_415892.5  ubiquitin carboxyl-terminal hydrolase 32 isoform X4

      Conserved Domains (3) summary
      COG5126
      Location:189339
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      COG5560
      Location:5181318
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cl02553
      Location:14891571
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    6. XM_046902701.1XP_046758657.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X5

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8244170..8304387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040687631.2XP_040543565.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X1

      Conserved Domains (3) summary
      COG5126
      Location:199363
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      COG5560
      Location:5421356
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cl02553
      Location:15271609
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    2. XM_040687632.2XP_040543566.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X2

      Conserved Domains (3) summary
      COG5126
      Location:199363
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      COG5560
      Location:5421342
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cl02553
      Location:15131595
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    3. XM_040687636.2XP_040543570.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X6

      Conserved Domains (3) summary
      COG5126
      Location:199363
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      COG5560
      Location:4931307
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cl02553
      Location:14781560
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    4. XM_040687634.2XP_040543568.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X3

      Conserved Domains (3) summary
      COG5126
      Location:189339
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      COG5560
      Location:5181332
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cl02553
      Location:15031585
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    5. XM_040687635.2XP_040543569.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X4

      Conserved Domains (3) summary
      COG5126
      Location:189339
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      COG5560
      Location:5181318
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cl02553
      Location:14891571
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    6. XM_046930392.1XP_046786348.1  ubiquitin carboxyl-terminal hydrolase 32 isoform X5