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    EXT2 exostosin glycosyltransferase 2 [ Gallus gallus (chicken) ]

    Gene ID: 425859, updated on 3-Dec-2024

    Summary

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    Symbol
    EXT2provided by CGNC
    Full Name
    exostosin glycosyltransferase 2provided by CGNC
    Primary source
    CGNC:52601
    See related
    Ensembl:ENSGALG00010019800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    exostosin-2
    Orthologs
    human mouse all
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    Genomic context

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    See EXT2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (21262211..21335770)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (21222838..21297071)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene C11orf96 homolog Neighboring gene 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) Neighboring gene uncharacterized LOC121110870 Neighboring gene ALX homeobox 4 Neighboring gene uncharacterized LOC107053452

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exostosin-2
    Names
    exostoses (multiple) 2
    exostosin 2
    NP_001292367.1
    XP_046774773.1
    XP_046797850.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001305438.3 → NP_001292367.1  exostosin-2

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000214
      UniProtKB/TrEMBL
      A0A8V0ZBJ8, A0A8V0ZC80, A0A8V0ZI75
      Related
      ENSGALP00010028295.1, ENSGALT00010047878.1
      Conserved Domains (2) summary
      pfam03016
      Location:100 → 380
      Exostosin; Exostosin family
      pfam09258
      Location:456 → 690
      Glyco_transf_64; Glycosyl transferase family 64 domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      21262211..21335770
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046941894.1 → XP_046797850.1  exostosin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZC90, A0A8V0ZI66
      Related
      ENSGALP00010028285.1, ENSGALT00010047840.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      21222838..21297071
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046918817.1 → XP_046774773.1  exostosin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZC90, A0A8V0ZI66

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001031349.1: Suppressed sequence

      Description
      NM_001031349.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein Strain
    Heading Accession and Version

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