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    TRABD TraB domain containing [ Gallus gallus (chicken) ]

    Gene ID: 417746, updated on 3-Dec-2024

    Summary

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    Official Symbol
    TRABDprovided by CGNC
    Official Full Name
    TraB domain containingprovided by CGNC
    Primary source
    CGNC:6609
    See related
    Ensembl:ENSGALG00010001540
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TRABD in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (20399144..20442355)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (20634009..20674586)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene Mov10 RISC complex RNA helicase like 1 Neighboring gene uncharacterized LOC107049700 Neighboring gene pannexin 2 Neighboring gene tetraspanin-7-like Neighboring gene uncharacterized LOC124417103 Neighboring gene selenoprotein O

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    traB domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030732.3 → NP_001025903.2  traB domain-containing protein

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000012
      UniProtKB/TrEMBL
      Q5F403
      Related
      ENSGALP00010001986.1, ENSGALT00010003548.1
      Conserved Domains (1) summary
      cd14726
      Location:72 → 270
      TraB_PrgY-like; TraB/PryY confer plasmid-borne pheromone resistance

    2. NM_001389253.2 → NP_001376182.1  traB domain-containing protein

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000012
      UniProtKB/TrEMBL
      Q5F403
      Conserved Domains (1) summary
      cd14726
      Location:72 → 270
      TraB_PrgY-like; TraB/PryY confer plasmid-borne pheromone resistance

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      20399144..20442355
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046934606.1 → XP_046790562.1  traB domain-containing protein isoform X2

      UniProtKB/TrEMBL
      Q5F403

    2. XM_046934797.1 → XP_046790753.1  traB domain-containing protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0X5Y7

    3. XM_046934586.1 → XP_046790542.1  traB domain-containing protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5NX84, A0A8V0X5Y7
      Related
      ENSGALP00010001984.1, ENSGALT00010003546.1

    4. XM_015274569.3 → XP_015130055.1  traB domain-containing protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0X5Y7
      Conserved Domains (1) summary
      cl12050
      Location:25 → 216
      TraB; TraB family

    5. XM_046934660.1 → XP_046790616.1  traB domain-containing protein isoform X3

      UniProtKB/TrEMBL
      Q5F403

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      20634009..20674586
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046907139.1 → XP_046763095.1  traB domain-containing protein isoform X2

      UniProtKB/TrEMBL
      Q5F403

    2. XM_046907142.1 → XP_046763098.1  traB domain-containing protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0X5Y7

    3. XM_046907138.1 → XP_046763094.1  traB domain-containing protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5NX84, A0A8V0X5Y7

    4. XM_046907141.1 → XP_046763097.1  traB domain-containing protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0X5Y7

    5. XM_046907140.1 → XP_046763096.1  traB domain-containing protein isoform X3

      UniProtKB/TrEMBL
      Q5F403
    Nucleotide Protein Strain
    Heading Accession and Version

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