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    F49E2.2 SH3 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181177, updated on 18-Sep-2024

    Summary

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    Official Symbol
    F49E2.2
    Official Full Name
    SH3 domain-containing protein
    Primary source
    WormBase:WBGene00009886
    Locus tag
    CELE_F49E2.2
    See related
    AllianceGenome:WB:WBGene00009886
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See F49E2.2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    12
    Sequence:
    Chromosome: X; NC_003284.9 (9567296..9573659)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene tRNA-Val Neighboring gene GTP 3',8-cyclase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Globin domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    SH3 domain-containing protein
    NP_001123147.1
    • Confirmed by transcript evidence
    NP_001379061.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      9567296..9573659
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001129675.5 → NP_001123147.1  SH3 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001123147.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A6ZJ46
      Conserved Domains (1) summary
      smart00326
      Location:524 → 574
      SH3; Src homology 3 domains

    2. NM_001392825.1 → NP_001379061.1  SH3 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20621
      Conserved Domains (1) summary
      smart00326
      Location:470 → 520
      SH3; Src homology 3 domains
    Nucleotide Protein
    Heading Accession and Version

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