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    CFAP54 cilia and flagella associated protein 54 [ Gallus gallus (chicken) ]

    Gene ID: 417921, updated on 17-Aug-2024

    Summary

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    Symbol
    CFAP54provided by CGNC
    Full Name
    cilia and flagella associated protein 54provided by CGNC
    Primary source
    CGNC:50620
    See related
    Ensembl:ENSGALG00010011960
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    C12orf63; C1H12ORF63
    Orthologs
    human mouse all
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    Genomic context

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    See CFAP54 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    70
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (45953414..46057529)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (46305311..46409614)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene ELK3, ETS transcription factor Neighboring gene uncharacterized LOC107052950 Neighboring gene cyclin dependent kinase 17 Neighboring gene NEDD1 gamma-tubulin ring complex targeting factor Neighboring gene uncharacterized LOC112533392

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cilia- and flagella-associated protein 54

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      45953414..46057529
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003640365.6 → XP_003640413.3  cilia- and flagella-associated protein 54 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YBY8, A0A8V0YFF9
      Related
      ENSGALP00010016461.1, ENSGALT00010028647.1

    2. XM_040672104.2 → XP_040528038.1  cilia- and flagella-associated protein 54 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YBY8

    3. XM_040672111.2 → XP_040528045.1  cilia- and flagella-associated protein 54 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YBY8

    4. XM_040672120.2 → XP_040528054.1  cilia- and flagella-associated protein 54 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YBY8

    5. XM_040672127.2 → XP_040528061.1  cilia- and flagella-associated protein 54 isoform X5

      UniProtKB/TrEMBL
      A0A8V0YBY8

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      46305311..46409614
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040662142.2 → XP_040518076.1  cilia- and flagella-associated protein 54 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YBY8

    2. XM_040662143.2 → XP_040518077.1  cilia- and flagella-associated protein 54 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YBY8

    3. XM_040662144.2 → XP_040518078.1  cilia- and flagella-associated protein 54 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YBY8

    4. XM_040662145.2 → XP_040518079.1  cilia- and flagella-associated protein 54 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YBY8

    5. XM_040662146.2 → XP_040518080.1  cilia- and flagella-associated protein 54 isoform X5

      UniProtKB/TrEMBL
      A0A8V0YBY8
    Nucleotide Protein
    Heading Accession and Version

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