ATP2C1 ATPase secretory pathway Ca2+ transporting 1 [Gallus gallus (chicken)] - Gene

Summary

Symbol: ATP2C1provided by CGNC
Full Name: ATPase secretory pathway Ca2+ transporting 1provided by CGNC
Primary source: CGNC:8802
See related: Ensembl:ENSGALG00010018485
Gene type: protein coding
RefSeq status: MODEL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2

Exon count:: 37

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	2	NC_052533.1 (41526766..41627135)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	2	NC_052574.1 (41602997..41685615)

Chromosome 2 - NC_052533.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info	PubMed
enables P-type calcium transporter activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in calcium ion transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in intracellular calcium ion homeostasis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in manganese ion transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in Golgi membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in endoplasmic reticulum	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: calcium-transporting ATPase type 2C member 1

Names: ATPase, Ca++ transporting, type 2C, member 1

XP_015137242.2

EC 7.2.2.10

XP_015137243.1

EC 7.2.2.10

XP_015137244.1

EC 7.2.2.10

XP_015137245.1

EC 7.2.2.10

XP_015137246.1

EC 7.2.2.10

XP_040518770.1

EC 7.2.2.10

XP_040518771.1

EC 7.2.2.10

XP_040518772.1

EC 7.2.2.10

XP_040518773.1

EC 7.2.2.10

XP_040518774.1

EC 7.2.2.10

XP_040518775.1

EC 7.2.2.10

XP_040548752.1

EC 7.2.2.10

XP_046767944.1

EC 7.2.2.10

XP_046767945.1

EC 7.2.2.10

XP_046767946.1

EC 7.2.2.10

XP_046767947.1

EC 7.2.2.10

XP_046767948.1

EC 7.2.2.10

XP_046787710.1

EC 7.2.2.10

XP_046787712.1

EC 7.2.2.10

XP_046787714.1

EC 7.2.2.10

XP_046787721.1

EC 7.2.2.10

XP_046787722.1

EC 7.2.2.10

XP_046787724.1

EC 7.2.2.10

XP_046787727.1

EC 7.2.2.10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

41526766..41627135

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046931754.1 → XP_046787710.1 calcium-transporting ATPase type 2C member 1 isoform X1

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0Z7T1
XM_046931756.1 → XP_046787712.1 calcium-transporting ATPase type 2C member 1 isoform X1

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0Z7T1
XM_015281756.4 → XP_015137242.2 calcium-transporting ATPase type 2C member 1 isoform X1

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0Z7T1

Related

ENSGALP00010026656.1, ENSGALT00010044734.1

Conserved Domains (1) summary

cd02085
Location:87 → 929

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
XM_046931768.1 → XP_046787724.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9
XM_046931758.1 → XP_046787714.1 calcium-transporting ATPase type 2C member 1 isoform X1

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0Z7T1
XM_046931765.1 → XP_046787721.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9
XM_046931771.1 → XP_046787727.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9
XM_015281758.4 → XP_015137244.1 calcium-transporting ATPase type 2C member 1 isoform X2

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0ZDM9

Conserved Domains (1) summary

cd02085
Location:54 → 896

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
XM_046931766.1 → XP_046787722.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9
XM_015281759.4 → XP_015137245.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9

Related

ENSGALP00010026643.1, ENSGALT00010044721.1

Conserved Domains (1) summary

cd02085
Location:38 → 880

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
XM_015281757.4 → XP_015137243.1 calcium-transporting ATPase type 2C member 1 isoform X2

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0ZDM9

Conserved Domains (1) summary

cd02085
Location:54 → 896

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
XM_015281760.4 → XP_015137246.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9

Related

ENSGALP00010026637.1, ENSGALT00010044715.1

Conserved Domains (1) summary

cd02085
Location:38 → 880

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
XM_040692818.2 → XP_040548752.1 calcium-transporting ATPase type 2C member 1 isoform X2

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0ZDM9

Related

ENSGALP00010026649.1, ENSGALT00010044727.1

Conserved Domains (1) summary

cd02085
Location:54 → 896

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

41602997..41685615

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040662836.2 → XP_040518770.1 calcium-transporting ATPase type 2C member 1 isoform X1

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0Z7T1

Conserved Domains (1) summary

cd02085
Location:87 → 929

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
XM_046911991.1 → XP_046767947.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9
XM_046911988.1 → XP_046767944.1 calcium-transporting ATPase type 2C member 1 isoform X1

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0Z7T1
XM_046911989.1 → XP_046767945.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9
XM_046911992.1 → XP_046767948.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9
XM_040662837.2 → XP_040518771.1 calcium-transporting ATPase type 2C member 1 isoform X2

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0ZDM9

Conserved Domains (1) summary

cd02085
Location:54 → 896

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
XM_046911990.1 → XP_046767946.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9
XM_040662841.2 → XP_040518775.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9

Conserved Domains (1) summary

cd02085
Location:38 → 880

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
XM_040662838.2 → XP_040518772.1 calcium-transporting ATPase type 2C member 1 isoform X2

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0ZDM9

Conserved Domains (1) summary

cd02085
Location:54 → 896

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
XM_040662840.2 → XP_040518774.1 calcium-transporting ATPase type 2C member 1 isoform X3

UniProtKB/TrEMBL

A0A8V0Z072, A0A8V0Z6R9

Conserved Domains (1) summary

cd02085
Location:38 → 880

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
XM_040662839.2 → XP_040518773.1 calcium-transporting ATPase type 2C member 1 isoform X2

UniProtKB/TrEMBL

A0A8V0Z6R9, A0A8V0ZDM9

Conserved Domains (1) summary

cd02085
Location:54 → 896

P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p