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    PNLDC1 PARN like, ribonuclease domain containing 1 [ Gallus gallus (chicken) ]

    Gene ID: 428595, updated on 3-Dec-2024

    Summary

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    Symbol
    PNLDC1provided by CGNC
    Full Name
    PARN like, ribonuclease domain containing 1provided by CGNC
    Primary source
    CGNC:8836
    See related
    Ensembl:ENSGALG00010004390
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See PNLDC1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (45257402..45268024, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (45161365..45171985, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053026 Neighboring gene insulin like growth factor 2 receptor Neighboring gene MAS1 proto-oncogene, G protein-coupled receptor Neighboring gene small nucleolar RNA SNORA29 Neighboring gene mitochondrial ribosomal protein L18 Neighboring gene t-complex 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(A)-specific ribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear-transcribed mRNA poly(A) tail shortening IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    poly(A)-specific ribonuclease PARN-like domain-containing protein 1; poly(A)-specific ribonuclease PNLDC1
    Names
    poly(A)-specific ribonuclease (PARN)-like domain containing 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      45257402..45268024 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004935572.5 → XP_004935629.3  poly(A)-specific ribonuclease PNLDC1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0XJQ4

    2. XM_040698155.2 → XP_040554089.2  poly(A)-specific ribonuclease PNLDC1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XJQ4

    3. XM_426152.8 → XP_426152.6  poly(A)-specific ribonuclease PNLDC1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XJQ4
      Related
      ENSGALP00010006002.1, ENSGALT00010010259.1

    4. XM_004935573.5 → XP_004935630.3  poly(A)-specific ribonuclease PNLDC1 isoform X6

    5. XM_040698154.2 → XP_040554088.2  poly(A)-specific ribonuclease PNLDC1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJQ4

    6. XM_040698156.2 → XP_040554090.2  poly(A)-specific ribonuclease PNLDC1 isoform X3

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      45161365..45171985 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040667946.2 → XP_040523880.2  poly(A)-specific ribonuclease PNLDC1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0XJQ4

    2. XM_040667945.2 → XP_040523879.2  poly(A)-specific ribonuclease PNLDC1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XJQ4

    3. XM_040667947.2 → XP_040523881.2  poly(A)-specific ribonuclease PNLDC1 isoform X6

    Nucleotide Protein
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