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    KCNJ1 potassium inwardly rectifying channel subfamily J member 1 [ Gallus gallus (chicken) ]

    Gene ID: 428236, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KCNJ1provided by CGNC
    Official Full Name
    potassium inwardly rectifying channel subfamily J member 1provided by CGNC
    Primary source
    CGNC:791
    See related
    Ensembl:ENSGALG00010023426
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See KCNJ1 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 24 NC_052555.1 (1120265..1136715, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 24 NC_052596.1 (1079869..1096319, complement)

    Chromosome 24 - NC_052555.1Genomic Context describing neighboring genes Neighboring gene v-ets avian erythroblastosis virus E26 oncogene homolog 1 Neighboring gene Fli-1 proto-oncogene, ETS transcription factor Neighboring gene Potassium inwardly rectifying channel subfamily J member 5 Neighboring gene Rho GTPase activating protein 33 Neighboring gene uncharacterized LOC121107516 Neighboring gene BARX homeobox 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rare independent mutations in renal salt handling genes contribute to blood pressure variation. Ji W, et al. Nat Genet, 2008 May. PMID 18391953, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP-activated inward rectifier potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-sensitive inward rectifier potassium channel 1
    Names
    potassium voltage-gated channel subfamily J member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052555.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1120265..1136715 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004947967.5 → XP_004948024.1  ATP-sensitive inward rectifier potassium channel 1

      UniProtKB/TrEMBL
      A0A8V0ZV50
      Related
      ENSGALP00010034727.1, ENSGALT00010057093.1
      Conserved Domains (2) summary
      pfam01007
      Location:24 → 164
      IRK; Inward rectifier potassium channel
      pfam17655
      Location:172 → 341
      IRK_C; Inward rectifier potassium channel C-terminal domain

    RNA

    1. XR_001469989.4 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052596.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1079869..1096319 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040690452.2 → XP_040546386.1  ATP-sensitive inward rectifier potassium channel 1

      UniProtKB/TrEMBL
      A0A8V0ZV50
      Conserved Domains (2) summary
      pfam01007
      Location:24 → 164
      IRK; Inward rectifier potassium channel
      pfam17655
      Location:172 → 341
      IRK_C; Inward rectifier potassium channel C-terminal domain

    RNA

    1. XR_005855980.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials