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    SLC9A3 solute carrier family 9 member A3 [ Gallus gallus (chicken) ]

    Gene ID: 420801, updated on 3-Dec-2024

    Summary

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    Symbol
    SLC9A3provided by CGNC
    Full Name
    solute carrier family 9 member A3provided by CGNC
    Primary source
    CGNC:9501
    See related
    Ensembl:ENSGALG00010007655
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC9A3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (55391772..55458047)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (55327633..55393922)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene U5 spliceosomal RNA Neighboring gene envelope glycoprotein gp95-like Neighboring gene uncharacterized LOC112531751 Neighboring gene uncharacterized LOC101749475 Neighboring gene leucine rich repeat containing 14B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sodium:proton antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of pH IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in brush border membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium/hydrogen exchanger 3
    Names
    solute carrier family 9 (sodium/hydrogen exchanger), member 3
    solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      55391772..55458047
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004935075.5 → XP_004935132.1  sodium/hydrogen exchanger 3 isoform X3

      See identical proteins and their annotated locations for XP_004935132.1

      UniProtKB/TrEMBL
      A0A1D5NYQ5, A0A8V0Y1E7
      Related
      ENSGALP00010010016.1, ENSGALT00010018225.1
      Conserved Domains (1) summary
      TIGR00840
      Location:43 → 642
      b_cpa1; sodium/hydrogen exchanger 3

    2. XM_040696321.2 → XP_040552255.1  sodium/hydrogen exchanger 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XVJ9
      Related
      ENSGALP00010010019.1, ENSGALT00010018228.1
      Conserved Domains (1) summary
      TIGR00840
      Location:43 → 642
      b_cpa1; sodium/hydrogen exchanger 3

    3. XM_046938104.1 → XP_046794060.1  sodium/hydrogen exchanger 3 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Y1E7

    4. XM_040696322.2 → XP_040552256.1  sodium/hydrogen exchanger 3 isoform X2

      Conserved Domains (1) summary
      TIGR00840
      Location:37 → 541
      b_cpa1; sodium/hydrogen exchanger 3

    5. XM_418895.7 → XP_418895.3  sodium/hydrogen exchanger 3 isoform X4

      See identical proteins and their annotated locations for XP_418895.3

      UniProtKB/TrEMBL
      A0A1D5NYQ5, A0A8V0Y1E7
      Related
      ENSGALP00010010013.1, ENSGALT00010018222.1
      Conserved Domains (1) summary
      TIGR00840
      Location:43 → 642
      b_cpa1; sodium/hydrogen exchanger 3

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      55327633..55393922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040664561.2 → XP_040520495.1  sodium/hydrogen exchanger 3 isoform X3

      UniProtKB/TrEMBL
      A0A1D5NYQ5, A0A8V0Y1E7
      Conserved Domains (1) summary
      TIGR00840
      Location:43 → 642
      b_cpa1; sodium/hydrogen exchanger 3

    2. XM_040664559.2 → XP_040520493.1  sodium/hydrogen exchanger 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XVJ9
      Conserved Domains (1) summary
      TIGR00840
      Location:43 → 642
      b_cpa1; sodium/hydrogen exchanger 3

    3. XM_046912592.1 → XP_046768548.1  sodium/hydrogen exchanger 3 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Y1E7

    4. XM_040664560.2 → XP_040520494.1  sodium/hydrogen exchanger 3 isoform X2

      Conserved Domains (1) summary
      TIGR00840
      Location:37 → 541
      b_cpa1; sodium/hydrogen exchanger 3

    5. XM_040664562.2 → XP_040520496.1  sodium/hydrogen exchanger 3 isoform X4

      UniProtKB/TrEMBL
      A0A1D5NYQ5, A0A8V0Y1E7
      Conserved Domains (1) summary
      TIGR00840
      Location:43 → 642
      b_cpa1; sodium/hydrogen exchanger 3
    Nucleotide Protein
    Heading Accession and Version

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