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    CLIP2 CAP-GLY domain containing linker protein 2 [ Gallus gallus (chicken) ]

    Gene ID: 417488, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CLIP2provided by CGNC
    Official Full Name
    CAP-GLY domain containing linker protein 2provided by CGNC
    Primary source
    CGNC:881
    See related
    Ensembl:ENSGALG00010029385
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CLIP2 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (3258667..3318184, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (2987386..3046923, complement)

    Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIi Neighboring gene GTF2I repeat domain containing 1 Neighboring gene uncharacterized LOC107054784 Neighboring gene uncharacterized LOC101747302 Neighboring gene replication factor C subunit 2 Neighboring gene linker for activation of T cells family member 2 Neighboring gene eukaryotic translation initiation factor 4H

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule plus-end binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule plus-end IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CAP-Gly domain-containing linker protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      3258667..3318184 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015295959.4 → XP_015151445.1  CAP-Gly domain-containing linker protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AJZ4
      Related
      ENSGALP00010043764.1, ENSGALT00010071073.1
      Conserved Domains (2) summary
      COG1196
      Location:348 → 930
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam01302
      Location:212 → 276
      CAP_GLY; CAP-Gly domain

    2. XM_015295957.4 → XP_015151443.1  CAP-Gly domain-containing linker protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V1ALZ1
      Related
      ENSGALP00010043763.1, ENSGALT00010071072.1
      Conserved Domains (2) summary
      COG1196
      Location:348 → 965
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam01302
      Location:212 → 276
      CAP_GLY; CAP-Gly domain

    RNA

    1. XR_005841061.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2987386..3046923 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040687035.2 → XP_040542969.1  CAP-Gly domain-containing linker protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AJZ4
      Conserved Domains (2) summary
      COG1196
      Location:348 → 930
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam01302
      Location:212 → 276
      CAP_GLY; CAP-Gly domain

    2. XM_040687034.2 → XP_040542968.1  CAP-Gly domain-containing linker protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V1ALZ1
      Conserved Domains (2) summary
      COG1196
      Location:348 → 965
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam01302
      Location:212 → 276
      CAP_GLY; CAP-Gly domain

    RNA

    1. XR_005854983.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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