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    ATP10D ATPase phospholipid transporting 10D (putative) [ Gallus gallus (chicken) ]

    Gene ID: 422768, updated on 17-Aug-2024

    Summary

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    Symbol
    ATP10Dprovided by CGNC
    Full Name
    ATPase phospholipid transporting 10D (putative)provided by CGNC
    Primary source
    CGNC:10579
    See related
    Ensembl:ENSGALG00010013459
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human all
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    Genomic context

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    See ATP10D in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (66281235..66319369, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (66265326..66303465, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene nuclear transcription factor, X-box binding like 1 Neighboring gene uncharacterized LOC124417970 Neighboring gene corin, serine peptidase Neighboring gene gamma-aminobutyric acid receptor subunit beta-1 Neighboring gene COMM domain containing 8 Neighboring gene uncharacterized LOC107053242

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATPase-coupled intramembrane lipid transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phospholipid translocation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable phospholipid-transporting ATPase VD; phospholipid-transporting ATPase VD
    Names
    ATPase, class V, type 10D
    XP_004936114.2
    XP_015140973.2
    XP_025005816.2
    XP_040527571.1
    XP_040527572.1
    XP_040527573.1
    XP_040527574.1
    XP_420722.5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      66281235..66319369 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004936057.5 → XP_004936114.2  phospholipid-transporting ATPase VD isoform X2

      Conserved Domains (1) summary
      cd02073
      Location:66 → 1158
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    2. XM_420722.8 → XP_420722.5  phospholipid-transporting ATPase VD isoform X1

      UniProtKB/TrEMBL
      A0A8V0YKR1
      Related
      ENSGALP00010019171.1, ENSGALT00010032404.1
      Conserved Domains (1) summary
      cd02073
      Location:66 → 1195
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    3. XM_015285487.4 → XP_015140973.2  phospholipid-transporting ATPase VD isoform X1

      UniProtKB/TrEMBL
      A0A8V0YKR1
      Conserved Domains (1) summary
      cd02073
      Location:66 → 1195
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    4. XM_025150048.2 → XP_025005816.2  phospholipid-transporting ATPase VD isoform X3

      Conserved Domains (1) summary
      cd02073
      Location:1 → 1079
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      66265326..66303465 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040671639.2 → XP_040527573.1  phospholipid-transporting ATPase VD isoform X5

      Conserved Domains (1) summary
      cd02073
      Location:66 → 1158
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    2. XM_040671637.2 → XP_040527571.1  phospholipid-transporting ATPase VD isoform X4

      Conserved Domains (1) summary
      cd02073
      Location:66 → 1195
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    3. XM_040671638.2 → XP_040527572.1  phospholipid-transporting ATPase VD isoform X4

      Conserved Domains (1) summary
      cd02073
      Location:66 → 1195
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    4. XM_040671640.1 → XP_040527574.1  phospholipid-transporting ATPase VD isoform X6

      Conserved Domains (1) summary
      cd02073
      Location:1 → 1079
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
    Nucleotide Protein
    Heading Accession and Version

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