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    RBM47 RNA binding motif protein 47 [ Gallus gallus (chicken) ]

    Gene ID: 770355, updated on 3-Dec-2024

    Summary

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    Symbol
    RBM47provided by CGNC
    Full Name
    RNA binding motif protein 47provided by CGNC
    Primary source
    CGNC:55964
    See related
    Ensembl:ENSGALG00010015931
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RBM47 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (68381659..68457293)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (68367045..68442835)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101749763 Neighboring gene NOP2/Sun RNA methyltransferase family member 7 Neighboring gene uncharacterized LOC121110759 Neighboring gene uncharacterized LOC107053235 Neighboring gene cholinergic receptor nicotinic alpha 9 subunit Neighboring gene uncharacterized LOC124417950

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 47

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      68381659..68457293
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046940918.1 → XP_046796874.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0

    2. XM_046940919.1 → XP_046796875.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0

    3. XM_040699811.2 → XP_040555745.1  RNA-binding protein 47 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YTY7
      Related
      ENSGALP00010022201.1, ENSGALT00010038393.1
      Conserved Domains (1) summary
      TIGR01648
      Location:13 → 596
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    4. XM_046940920.1 → XP_046796876.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0
      Related
      ENSGALP00010022209.1, ENSGALT00010038402.1

    5. XM_046940917.1 → XP_046796873.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0

    6. XM_046940914.1 → XP_046796870.1  RNA-binding protein 47 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YMK0

    7. XM_046940915.1 → XP_046796871.1  RNA-binding protein 47 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YTY7

    8. XM_004936107.5 → XP_004936164.2  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0
      Conserved Domains (1) summary
      TIGR01648
      Location:13 → 597
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    9. XM_046940916.1 → XP_046796872.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0

    10. XM_040699810.2 → XP_040555744.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0
      Conserved Domains (1) summary
      TIGR01648
      Location:13 → 597
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    11. XM_004936111.5 → XP_004936168.1  RNA-binding protein 47 isoform X3

      See identical proteins and their annotated locations for XP_004936168.1

      UniProtKB/TrEMBL
      A0A8V0YMK0
      Conserved Domains (1) summary
      TIGR01648
      Location:13 → 597
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      68367045..68442835
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046917257.1 → XP_046773213.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0

    2. XM_040671115.2 → XP_040527049.1  RNA-binding protein 47 isoform X9

      UniProtKB/TrEMBL
      A0A8V0YMK0
      Conserved Domains (1) summary
      TIGR01648
      Location:61 → 645
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    3. XM_046917256.1 → XP_046773212.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0

    4. XM_046917254.1 → XP_046773210.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0

    5. XM_040671117.2 → XP_040527051.1  RNA-binding protein 47 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YTY7
      Conserved Domains (1) summary
      TIGR01648
      Location:13 → 596
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    6. XM_046917258.1 → XP_046773214.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0

    7. XM_046917253.1 → XP_046773209.1  RNA-binding protein 47 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YMK0

    8. XM_040671110.2 → XP_040527044.2  RNA-binding protein 47 isoform X5

      UniProtKB/TrEMBL
      A0A8V0YMK0

    9. XM_040671111.2 → XP_040527045.2  RNA-binding protein 47 isoform X6

      UniProtKB/TrEMBL
      A0A8V0YTY7

    10. XM_040671112.2 → XP_040527046.2  RNA-binding protein 47 isoform X7

      UniProtKB/TrEMBL
      A0A8V0YMK0

    11. XM_040671114.2 → XP_040527048.2  RNA-binding protein 47 isoform X8

      UniProtKB/TrEMBL
      A0A8V0YTY7

    12. XM_046917255.1 → XP_046773211.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0

    13. XM_040671116.2 → XP_040527050.1  RNA-binding protein 47 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YMK0
      Conserved Domains (1) summary
      TIGR01648
      Location:13 → 597
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    Nucleotide Protein
    Heading Accession and Version

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