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    Actr10 ARP10 actin-related protein 10 [ Mus musculus (house mouse) ]

    Gene ID: 56444, updated on 9-Dec-2024

    Summary

    Official Symbol
    Actr10provided by MGI
    Official Full Name
    ARP10 actin-related protein 10provided by MGI
    Primary source
    MGI:MGI:1891654
    See related
    Ensembl:ENSMUSG00000021076 AllianceGenome:MGI:1891654
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Arp11; Actr11
    Summary
    Acts upstream of or within microtubule-based movement. Part of dynactin complex. Is expressed in several structures, including alimentary system; brain; genitourinary system; respiratory system; and sensory organ. Orthologous to human ACTR10 (actin related protein 10). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in testis adult (RPKM 25.1), CNS E18 (RPKM 14.8) and 22 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Actr10 in Genome Data Viewer
    Location:
    12 C2; 12 29.39 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (70984631..71011492)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (70937857..70964718)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene FERM domain containing 6 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:71954025-71954293 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:71974587-71974696 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:71981618-71981801 Neighboring gene STARR-seq mESC enhancer starr_32405 Neighboring gene STARR-seq mESC enhancer starr_32406 Neighboring gene predicted gene, 32664 Neighboring gene predicted gene, 46355 Neighboring gene STARR-positive B cell enhancer ABC_E8488 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:72069569-72069678 Neighboring gene STARR-positive B cell enhancer ABC_E1441 Neighboring gene STARR-positive B cell enhancer ABC_E7144 Neighboring gene STARR-positive B cell enhancer ABC_E1442 Neighboring gene nuclear encoded tRNA lysine 17 (anticodon CTT) Neighboring gene proteasome subunit alpha 3 Neighboring gene RIKEN cDNA 3110056K07 gene

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within microtubule-based movement IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in retrograde axonal transport of mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    part_of dynactin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of dynactin complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    actin-related protein 10
    Names
    ARP10 actin-related protein 10 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019785.2NP_062759.2  actin-related protein 10

      See identical proteins and their annotated locations for NP_062759.2

      Status: VALIDATED

      Source sequence(s)
      AC132325, AK090043, AK161642
      Consensus CDS
      CCDS25960.1
      UniProtKB/Swiss-Prot
      Q3TT18, Q99LU1, Q9QZB7
      Related
      ENSMUSP00000021479.6, ENSMUST00000021479.6
      Conserved Domains (1) summary
      cl25542
      Location:13364
      Actin; Actin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      70984631..71011492
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)