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    CG12541 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31650, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CG12541provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0029930
    Locus tag
    Dmel_CG12541
    See related
    AllianceGenome:FB:FBgn0029930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12541
    Summary
    Predicted to be involved in positive regulation of macroautophagy. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12541 in Genome Data Viewer
    Location:
    6E4-6F1; 1-19 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (7021608..7066052, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6915641..6960085, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene nullo Neighboring gene uncharacterized protein Neighboring gene Sex lethal Neighboring gene mir-4956 stem loop

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Iditarod, a Drosophila homolog of the Irisin precursor FNDC5, is critical for exercise performance and cardiac autophagy. Cobb T, et al. Proc Natl Acad Sci U S A, 2023 Sep 26. PMID 37722048, Free PMC Article
    2. Identification of expressed transposable element insertions in the sequenced genome of Drosophila melanogaster. Deloger M, et al. Gene, 2009 Jun 15. PMID 19332112
    3. Single cell transcriptome atlas of the Drosophila larval brain. Brunet Avalos C, et al. Elife, 2019 Nov 20. PMID 31746739, Free PMC Article
    4. A single-cell transcriptomic atlas of complete insect nervous systems across multiple life stages. Corrales M, et al. Neural Dev, 2022 Aug 24. PMID 36002881, Free PMC Article
    5. Expansion of the mutually exclusive spliced exome in Drosophila. Hatje K, et al. Nat Commun, 2013. PMID 24025855

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in positive regulation of macroautophagy IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12541-PD
    CG12541-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      7021608..7066052 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132150.3 → NP_572378.3  uncharacterized protein Dmel_CG12541, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572378.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q059A1, Q0KHV3, Q9W3T1
      Conserved Domains (1) summary
      pfam16066
      Location:119 → 255
      DUF4808; Domain of unknown function (DUF4808)

    2. NM_001042797.2 → NP_001036262.2  uncharacterized protein Dmel_CG12541, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036262.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q059A1, Q0KHV3, Q9W3T1
      Conserved Domains (1) summary
      pfam16066
      Location:119 → 255
      DUF4808; Domain of unknown function (DUF4808)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W3T1 Q9W3T1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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