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    EloB Elongin B [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42435, updated on 9-Dec-2024

    Summary

    Official Symbol
    EloBprovided by FlyBase
    Official Full Name
    Elongin Bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0023212
    Locus tag
    Dmel_CG4204
    See related
    AllianceGenome:FB:FBgn0023212
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4204; Dmel\CG4204; Elo-B; Elongin-B
    Summary
    Involved in several processes, including imaginal disc-derived wing vein specification; larval somatic muscle development; and negative regulation of receptor signaling pathway via JAK-STAT. Part of Cul2-RING ubiquitin ligase complex and elongin complex. Is expressed in several structures, including adult head; adult heart; anterior endoderm; embryonic/larval midgut primordium; and mesoderm. Orthologous to human ELOB (elongin B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See EloB in Genome Data Viewer
    Location:
    92F2-92F2; 3-69 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (20578222..20579850, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (16403944..16405572, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene mitochondrial transcription factor A Neighboring gene uncharacterized protein Neighboring gene Signal recognition particle 14 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    part_of Cul2-RING ubiquitin ligase complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    part_of VCB complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of VCB complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of elongin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of elongin complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of elongin complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    elongin B
    Names
    CG4204-PA
    EloB-PA
    Elongin-B
    d-elongin B
    elonginB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      20578222..20579850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079692.4NP_524416.1  elongin B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524416.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O44226
      Related
      FBpp0083354
      Conserved Domains (1) summary
      cd01788
      Location:2104
      Ubl_ElonginB; ubiquitin-like (Ubl) domain found in transcription elongation factor B (Elongin B) and similar proteins