U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG2006 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43472, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG2006provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039664
    Locus tag
    Dmel_CG2006
    See related
    AllianceGenome:FB:FBgn0039664
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG2006
    Summary
    Predicted to enable tRNA-uridine aminocarboxypropyltransferase activity. Predicted to be involved in tRNA modification. Predicted to be active in nucleus. Orthologous to human DTWD1 (DTW domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG2006 in Genome Data Viewer
    Location:
    99B1-99B1; 3-99 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (29489468..29491383)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (25315190..25317105)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Protein tyrosine phosphatase 99A Neighboring gene long non-coding RNA:CR44022 Neighboring gene uncharacterized protein Neighboring gene Spase 12-subunit Neighboring gene uncharacterized protein Neighboring gene diedel

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Drosophila signal peptidase complex member Spase12 is required for development and cell differentiation. Haase Gilbert E, et al. PLoS One, 2013. PMID 23573290, Free PMC Article
    2. Identification of novel regulatory factor X (RFX) target genes by comparative genomics in Drosophila species. Laurençon A, et al. Genome Biol, 2007. PMID 17875208, Free PMC Article
    3. A genome-wide analysis of courting and mating responses in Drosophila melanogaster females. Lawniczak MK, et al. Genome, 2004 Oct. PMID 15499404
    4. Decoding cilia function: defining specialized genes required for compartmentalized cilia biogenesis. Avidor-Reiss T, et al. Cell, 2004 May 14. PMID 15137945
    5. The expression profile of purified Drosophila germline stem cells. Kai T, et al. Dev Biol, 2005 Jul 15. PMID 15927177

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables tRNA-uridine aminocarboxypropyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in tRNA modification IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG2006-PA
    CG2006-PB
    NP_001189310.1
    NP_651693.2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      29489468..29491383
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143436.3 → NP_651693.2  uncharacterized protein Dmel_CG2006, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651693.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VAL1
      Related
      FBpp0084793
      Conserved Domains (1) summary
      pfam03942
      Location:44 → 312
      DTW; DTW domain

    2. NM_001202381.2 → NP_001189310.1  uncharacterized protein Dmel_CG2006, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001189310.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VAL1
      Conserved Domains (1) summary
      pfam03942
      Location:44 → 312
      DTW; DTW domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SX75 Q8SX75
    Q9VAL1 Q9VAL1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools