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    Rab4 Rab4 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36992, updated on 17-Dec-2024

    Summary

    Official Symbol
    Rab4provided by FlyBase
    Official Full Name
    Rab4provided by FlyBase
    Primary source
    FLYBASE:FBgn0016701
    Locus tag
    Dmel_CG4921
    See related
    AllianceGenome:FB:FBgn0016701
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG 4921; CG4921; Dmel\CG4921; DmRab4; DRAB4; Q7KY04; rab4; RAB4; RAB4c
    Summary
    Predicted to enable GTP binding activity and GTPase activity. Involved in follicle cell of egg chamber-cell adhesion. Located in neuronal cell body; recycling endosome; and synapse. Is expressed in several structures, including adult ensheathing glial cell; brain; imaginal disc; mushroom body; and synaptic neuropil domain. Orthologous to several human genes including RAB4B (RAB4B, member RAS oncogene family). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Rab4 in Genome Data Viewer
    Location:
    54C9-54C10; 2-83 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17573462..17574979)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13460967..13462484)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Plenty of SH3s Neighboring gene Ubiquinol-cytochrome c reductase 6.4 kDa subunit Neighboring gene uncharacterized protein Neighboring gene Dicer-2 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in Rab protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in Rab protein signal transduction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in follicle cell of egg chamber-cell adhesion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of endocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane HDA PubMed 
    is_active_in recycling endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in recycling endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in synapse HDA PubMed 
    located_in synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in vesicle ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    Rab4
    Names
    CG4921-PA
    CG4921-PB
    Rab-protein 4
    Rab4-PA
    Rab4-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      17573462..17574979
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_166240.3NP_725696.1  Rab4, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725696.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B5RJE3, Q7KY04
      Related
      FBpp0086009
      Conserved Domains (1) summary
      cd04113
      Location:9169
      Rab4; Rab GTPase family 4 (Rab4)
    2. NM_079053.4NP_523777.1  Rab4, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523777.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B5RJE3, Q7KY04
      Related
      FBpp0086008
      Conserved Domains (1) summary
      cd04113
      Location:9169
      Rab4; Rab GTPase family 4 (Rab4)