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    CG4115 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41499, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG4115provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038017
    Locus tag
    Dmel_CG4115
    See related
    AllianceGenome:FB:FBgn0038017
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG4115
    Summary
    Predicted to enable carbohydrate binding activity. Is expressed in several structures, including adult head; adult heart; embryonic dorsal apodeme; embryonic esophagus; and epithelium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG4115 in Genome Data Viewer
    Location:
    87B8-87B8; 3-52 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (12360008..12363255)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (8185730..8188977)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene MBD-R2 Neighboring gene small non-coding RNA 419 Neighboring gene Tim17a1 Neighboring gene Glutathione S transferase D10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The putative C-type lectin Schlaff ensures epidermal barrier compactness in Drosophila. Zuber R, et al. Sci Rep, 2019 Mar 29. PMID 30926832, Free PMC Article
    2. Identification of FGF-dependent genes in the Drosophila tracheal system. Stahl M, et al. Gene Expr Patterns, 2007 Jan. PMID 16949886
    3. Lectin-like proteins in model organisms: implications for evolution of carbohydrate-binding activity. Dodd RB, et al. Glycobiology, 2001 May. PMID 11425795
    4. Comparative genomic analysis of C-type lectin-domain genes in seven holometabolous insect species. Lu Y, et al. Insect Biochem Mol Biol, 2020 Nov. PMID 32841718
    5. Participation of a galactose-specific C-type lectin in Drosophila immunity. Tanji T, et al. Biochem J, 2006 May 15. PMID 16475980, Free PMC Article

    See all (36) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables carbohydrate binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG4115-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      12360008..12363255
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141922.2 → NP_650179.1  uncharacterized protein Dmel_CG4115 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650179.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VGA3
      Related
      FBpp0082040
      Conserved Domains (1) summary
      cd00037
      Location:65 → 202
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VGA3 Q9VGA3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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