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    Zfp367 zinc finger protein 367 [ Mus musculus (house mouse) ]

    Gene ID: 238673, updated on 27-Nov-2024

    Summary

    Official Symbol
    Zfp367provided by MGI
    Official Full Name
    zinc finger protein 367provided by MGI
    Primary source
    MGI:MGI:2442266
    See related
    Ensembl:ENSMUSG00000044934 AllianceGenome:MGI:2442266
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ZFF29a; ZFF29b; Znf367; 8030486J21Rik
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleoplasm. Is expressed in several structures, including cerebral cortex; early conceptus; gonad; immune system; and liver. Orthologous to human ZNF367 (zinc finger protein 367). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in liver E14 (RPKM 9.6), liver E14.5 (RPKM 8.7) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Zfp367 in Genome Data Viewer
    Location:
    13 B3; 13 33.26 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (64280836..64301013, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (64133022..64153199, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene hydroxysteroid (17-beta) dehydrogenase 3 Neighboring gene solute carrier family 35, member D2 Neighboring gene STARR-seq mESC enhancer starr_34820 Neighboring gene STARR-positive B cell enhancer ABC_E5404 Neighboring gene STARR-positive B cell enhancer ABC_E928 Neighboring gene STARR-positive B cell enhancer ABC_E7250 Neighboring gene hyaluronic acid binding protein 4 Neighboring gene CDC14 cell division cycle 14B Neighboring gene predicted gene, 46424

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription factor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    zinc finger protein 367
    Names
    C2H2 zinc finger protein ZFF29

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001361047.1NP_001347976.1  zinc finger protein 367 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC158990, CT009717
      Conserved Domains (2) summary
      COG5048
      Location:43116
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:4565
      ZF_C2H2; C2H2 Zn finger [structural motif]
    2. NM_175494.5NP_780703.1  zinc finger protein 367 isoform 1

      See identical proteins and their annotated locations for NP_780703.1

      Status: VALIDATED

      Source sequence(s)
      AC158990, CT009717
      Consensus CDS
      CCDS26596.1
      UniProtKB/Swiss-Prot
      B1B191, B1B192, Q0VDT2, Q8BH90, Q8BI44, Q8BI88
      Related
      ENSMUSP00000050854.5, ENSMUST00000059817.12
      Conserved Domains (2) summary
      COG5048
      Location:157230
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:159179
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      64280836..64301013 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)