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    HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 [ Anas platyrhynchos (mallard) ]

    Gene ID: 101803586, updated on 8-Mar-2024

    Summary

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    Gene symbol
    HSD17B12
    Gene description
    hydroxysteroid 17-beta dehydrogenase 12
    Locus tag
    Anapl_17966
    See related
    EnsemblRapid:ENSAPLG00030006971
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anas platyrhynchos
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
    Also known as
    KAR; SPM2
    Orthologs
    human mouse all
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    Genomic context

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    See HSD17B12 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current ZJU1.0 (GCF_015476345.1) 5 NC_051776.1 (52784131..52857342)
    103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 5 NC_040050.1 (56134591..56208630)

    Chromosome 5 - NC_051776.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119717104 Neighboring gene translation initiation factor IF-2-like Neighboring gene alkB homolog 3, alpha-ketoglutarate dependent dioxygenase Neighboring gene uncharacterized LOC119717105 Neighboring gene chromosome 5 C11orf96 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    very-long-chain 3-oxoacyl-CoA reductase
    Names
    17-beta-HSD 12
    17-beta-hydroxysteroid dehydrogenase 12
    3-ketoacyl-CoA reductase
    Estradiol 17-beta-dehydrogenase 12
    Very-long-chain 3-oxoacyl-CoA reductase
    steroid dehydrogenase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ZJU1.0 Primary Assembly

    Genomic

    1. NC_051776.1 Reference ZJU1.0 Primary Assembly

      Range
      52784131..52857342
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027459191.2 → XP_027314992.2  very-long-chain 3-oxoacyl-CoA reductase

      UniProtKB/Swiss-Prot
      O57314
      Related
      ENSAPLP00030013836.1, ENSAPLT00030018467.1
      Conserved Domains (1) summary
      cd05356
      Location:77 → 317
      17beta-HSD1_like_SDR_c; 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O57314.1 GenPept UniProtKB/Swiss-Prot:O57314

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