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    hydrolase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2538874, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hydrolase
    Primary source
    PomBase:SPCC777.06c
    Locus tag
    SPOM_SPCC777.06C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003421.2 (1606351..1607962, complement)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene cysteine desulfurase nifs family protein Neighboring gene ncRNA Neighboring gene amino acid transporter Dip5 Neighboring gene ncRNA Neighboring gene RagC/D GTPase Gtr2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene alpha-1,2-mannosyltransferase Omh3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
    2. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables hydrolase activity ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    hydrolase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      1606351..1607962 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023242.3 → NP_588252.1  hydrolase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588252.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O74545
      Conserved Domains (2) summary
      COG1235
      Location:3 → 301
      PhnP; Phosphoribosyl 1,2-cyclic phosphodiesterase [Inorganic ion transport and metabolism]
      cd16279
      Location:7 → 234
      metallo-hydrolase-like_MBL-fold; uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo
    Nucleotide Protein
    Heading Accession and Version

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