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    tfb5 transcription factor TFIIH complex subunit Tfb5 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540257, updated on 18-Sep-2024

    Summary

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    Official Symbol
    tfb5
    Official Full Name
    transcription factor TFIIH complex subunit Tfb5
    Primary source
    PomBase:SPBC32F12.15
    Locus tag
    SPOM_SPBC32F12.15
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See tfb5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (2809874..2810539)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase Tdh1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene golgi membrane protein involved in vesicle-mediated transport Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein mni1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Suppression of the Schizosaccharomyces pombe cut12.1 cell-cycle defect by mutations in cdc25 and genes involved in transcriptional and translational control. Tallada VA, et al. Genetics, 2007 May. PMID 17409062, Free PMC Article
    2. RNA polymerase II initiation factor interactions and transcription start site selection. Li Y, et al. Science, 1994 Feb 11. PMID 8303296
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables RNA polymerase II general transcription initiation factor activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nucleotide-excision repair, preincision complex assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transcription initiation at RNA polymerase II promoter EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 
    part_of transcription factor TFIIH core complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of transcription factor TFIIH holo complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    transcription factor TFIIH complex subunit Tfb5

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2809874..2810539
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022074.3 → NP_596155.1  transcription factor TFIIH complex subunit Tfb5 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596155.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9HDW3
      Conserved Domains (1) summary
      pfam06331
      Location:1 → 66
      Tfb5; Transcription factor TFIIH complex subunit Tfb5
    Nucleotide Protein
    Heading Accession and Version

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