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    sst1 calcium permease [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543342, updated on 18-Sep-2024

    Summary

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    Official Symbol
    sst1
    Official Full Name
    calcium permease
    Primary source
    PomBase:SPAC521.04c
    Locus tag
    SPOM_SPAC521.04C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See sst1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (846022..849110, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene transcription factor TFIID complex, histone acetyltransferase subunit Taf111 Neighboring gene ncRNA Neighboring gene RNA methyltransferase Tgs1 Neighboring gene dehydrogenase Neighboring gene DNA repair WLM domain metallopeptidase Wss1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 40S ribosomal protein eS8 Neighboring gene DNA-directed RNA polymerase II complex subunit Rpb2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation of suppressor mutants of phosphatidylinositol 3-phosphate 5-kinase deficient cells in Schizosaccharomyces pombe. Onishi M, et al. Biosci Biotechnol Biochem, 2003 Aug. PMID 12951513
    2. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article
    3. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables calcium:proton antiporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in intracellular calcium ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in endomembrane system IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in endoplasmic reticulum HDA PubMed 
    is_active_in vacuolar membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    calcium permease

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      846022..849110 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018496.3 → NP_593099.1  calcium permease [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593099.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9P7B3
      Conserved Domains (3) summary
      COG0387
      Location:403 → 880
      ChaA; Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
      pfam01699
      Location:723 → 878
      Na_Ca_ex; Sodium/calcium exchanger protein
      pfam03733
      Location:196 → 251
      YccF; Inner membrane component domain
    Nucleotide Protein
    Heading Accession and Version

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