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    gma12 Golgi alpha-1,2-galactosyltransferase Gma12 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539101, updated on 18-Sep-2024

    Summary

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    Official Symbol
    gma12
    Official Full Name
    Golgi alpha-1,2-galactosyltransferase Gma12
    Primary source
    PomBase:SPCC736.04c
    Locus tag
    SPOM_SPCC736.04C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See gma12 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    1
    Sequence:
    Chromosome: III; NC_003421.2 (315827..317852, complement)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene phenylalanyl-tRNA synthetase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Localization of an alpha 1,2 galactosyltransferase activity to the Golgi apparatus of Schizosaccharomyces pombe. Chappell TG, et al. Mol Biol Cell, 1994 May. PMID 7522655, Free PMC Article
    2. Differences in in vivo acceptor specificity of two galactosyltransferases, the gmh3+ and gma12+ gene products from Schizosaccharomyces pombe. Yoko-o T, et al. Eur J Biochem, 1998 Nov 1. PMID 9839953
    3. Structural analysis of α1,3-linked galactose-containing oligosaccharides in Schizosaccharomyces pombe mutants harboring single and multiple α-galactosyltransferase genes disruptions. Ohashi T, et al. Glycobiology, 2011 Mar. PMID 21098516
    4. Identification of novel α1,3-galactosyltransferase and elimination of α-galactose-containing glycans by disruption of multiple α-galactosyltransferase genes in Schizosaccharomyces pombe. Ohashi T, et al. J Biol Chem, 2012 Nov 9. PMID 22988247, Free PMC Article
    5. Substrate specificities of α1,2- and α1,3-galactosyltransferases and characterization of Gmh1p and Otg1p in Schizosaccharomyces pombe. Fukunaga T, et al. Glycobiology, 2021 Sep 9. PMID 33909078

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables alpha-1,2-galactosyltransferase activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables alpha-1,2-galactosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables alpha-1,2-galactosyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in protein N-linked glycosylation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein N-linked glycosylation via asparagine EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in protein N-linked glycosylation via asparagine IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in protein O-linked glycosylation EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in protein O-linked glycosylation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in Golgi apparatus HDA PubMed 
    is_active_in Golgi membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in Golgi membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of mannan polymerase II complex ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    Golgi alpha-1,2-galactosyltransferase Gma12

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      315827..317852 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022768.3 → NP_587775.1  Golgi alpha-1,2-galactosyltransferase Gma12 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_587775.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q09174
      Conserved Domains (1) summary
      pfam05637
      Location:100 → 340
      Glyco_transf_34; galactosyl transferase GMA12/MNN10 family
    Nucleotide Protein
    Heading Accession and Version

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