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    atg22 vacuolar amino acid transmembrane transporter Atg22 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541826, updated on 18-Sep-2024

    Summary

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    Official Symbol
    atg22
    Official Full Name
    vacuolar amino acid transmembrane transporter Atg22
    Primary source
    PomBase:SPAC2G11.13
    Locus tag
    SPOM_SPAC2G11.13
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See atg22 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (836276..838256)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ATP-dependent RNA helicase Prh1 Neighboring gene RecQ type DNA helicase Rqh1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor TFIID complex, histone acetyltransferase subunit Taf111 Neighboring gene RNA methyltransferase Tgs1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Atg22p, a vacuolar membrane protein involved in the amino acid compartmentalization of Schizosaccharomyces pombe. Sugimoto N, et al. Biosci Biotechnol Biochem, 2011. PMID 21307582
    2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. S. pombe Atg22p plays an important role in the compartmentalization of amino acids
      Title: Atg22p, a vacuolar membrane protein involved in the amino acid compartmentalization of Schizosaccharomyces pombe.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables L-amino acid efflux transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    enables L-amino acid transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-alpha-amino acid transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in amino acid transmembrane export from vacuole IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in fungal-type vacuole membrane HDA PubMed 
    is_active_in fungal-type vacuole membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar amino acid transmembrane transporter Atg22

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      836276..838256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018491.3 → NP_593093.1  vacuolar amino acid transmembrane transporter Atg22 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593093.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q09812
      Conserved Domains (1) summary
      COG2270
      Location:1 → 522
      BtlA; MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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