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    hpz1 zf-PARP type zinc finger protein Hpz1, implicated in DNA repair [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540460, updated on 18-Sep-2024

    Summary

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    Official Symbol
    hpz1
    Official Full Name
    zf-PARP type zinc finger protein Hpz1, implicated in DNA repair
    Primary source
    PomBase:SPBC2A9.07c
    Locus tag
    SPOM_SPBC2A9.07C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See hpz1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003423.3 (2958679..2960159, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene putative transport protein Tvp23 Neighboring gene ncRNA Neighboring gene ditrans,polycis-decaprenylcistransferase Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene SNARE protein Sec22

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Hpz1 modulates the G1-S transition in fission yeast. Bøe CA, et al. PLoS One, 2012. PMID 22970243, Free PMC Article
    2. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article
    3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables DNA binding ISM
    Inferred from Sequence Model
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in mitochondrion HDA PubMed 
    is_active_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zf-PARP type zinc finger protein Hpz1, implicated in DNA repair

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2958679..2960159 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022135.4 → NP_596216.3  zf-PARP type zinc finger protein Hpz1, implicated in DNA repair [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596216.3

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9Y7K9
      Conserved Domains (1) summary
      pfam00645
      Location:11 → 94
      zf-PARP; Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
    Nucleotide Protein
    Heading Accession and Version

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