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    ogm1 ER membrane protein O-mannosyltransferase Ogm1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541418, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ogm1
    Official Full Name
    ER membrane protein O-mannosyltransferase Ogm1
    Primary source
    PomBase:SPAC22A12.07c
    Locus tag
    SPOM_SPAC22A12.07C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    oma1
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    Genomic context

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    See ogm1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (1166562..1169622, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene serine hydrolase-like protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene cardiolipin synthase/ hydrolase fusion protein Crd1;mitochondrial hydrolase, N-terminal portion of Crd1 fusion protein Neighboring gene U2 snRNP-associated protein Sap114

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein O-mannosylation is crucial for cell wall integrity, septation and viability in fission yeast. Willer T, et al. Mol Microbiol, 2005 Jul. PMID 15948957
    2. Characterization of O-mannosyltransferase family in Schizosaccharomyces pombe. Tanaka N, et al. Biochem Biophys Res Commun, 2005 May 13. PMID 15809069
    3. SIN-inhibitory phosphatase complex promotes Cdc11p dephosphorylation and propagates SIN asymmetry in fission yeast. Singh NS, et al. Curr Biol, 2011 Dec 6. PMID 22119525, Free PMC Article
    4. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article
    5. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables glycosyltransferase activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein O-linked mannosylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in protein O-linked mannosylation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in endomembrane system IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ER membrane protein O-mannosyltransferase Ogm1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      1166562..1169622 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018634.3 → NP_593237.1  ER membrane protein O-mannosyltransferase Ogm1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593237.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13898
      Conserved Domains (4) summary
      smart00472
      Location:374 → 432
      MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
      COG1928
      Location:11 → 716
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
      pfam02366
      Location:38 → 284
      PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
      pfam16192
      Location:518 → 710
      PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials