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    DNAJ domain-containing protein type Caj1/Djp1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540676, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DNAJ domain-containing protein type Caj1/Djp1
    Primary source
    PomBase:SPBC3E7.11c
    Locus tag
    SPOM_SPBC3E7.11C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003423.3 (2680226..2681690, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene DNA repair nuclease Rad13 Neighboring gene ncRNA Neighboring gene Sad1-UNC-like protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene methionine aminopeptidase Fma1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene chitin synthase regulatory factor Neighboring gene SYF2 family splicing factor syf2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The conserved Fanconi anemia nuclease Fan1 and the SUMO E3 ligase Pli1 act in two novel Pso2-independent pathways of DNA interstrand crosslink repair in yeast. Fontebasso Y, et al. DNA Repair (Amst), 2013 Dec. PMID 24192486, Free PMC Article
    2. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814
    3. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
    4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables Hsp70 protein binding ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein import into peroxisome matrix ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in protein insertion into mitochondrial outer membrane ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    DNAJ domain-containing protein type Caj1/Djp1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2680226..2681690 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022014.3 → NP_596098.1  DNAJ domain-containing protein type Caj1/Djp1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596098.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O59731
      Conserved Domains (3) summary
      COG0484
      Location:8 → 102
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam00226
      Location:9 → 72
      DnaJ; DnaJ domain
      pfam14308
      Location:150 → 350
      DnaJ-X; X-domain of DnaJ-containing
    Nucleotide Protein
    Heading Accession and Version

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