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    Igkv11-125 immunoglobulin kappa variable 11-125 [ Mus musculus (house mouse) ]

    Gene ID: 243428, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Igkv11-125provided by MGI
    Official Full Name
    immunoglobulin kappa variable 11-125provided by MGI
    Primary source
    MGI:MGI:3642338
    See related
    Ensembl:ENSMUSG00000095737 IMGT/GENE-DB:IGKV11-125; AllianceGenome:MGI:3642338
    Gene type
    other
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    if11; Gm10877
    Summary
    Predicted to be involved in immune response. Predicted to be part of immunoglobulin complex. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Igkv11-125 in Genome Data Viewer
    Location:
    6 C1; 6 31.01 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (67890557..67891036)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (67913573..67914052)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_16196 Neighboring gene immunoglobulin kappa chain complex Neighboring gene immunoglobulin kappa variable 14-126 Neighboring gene immunoglobulin kappa chain variable 9-124 Neighboring gene immunoglobulin kappa variable 9-123 Neighboring gene predicted gene, 25910

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The structural basis of a hapten-inhibitable kappa-chain idiotype. Vrana M, et al. J Immunol, 1979 May. PMID 109517
    2. The complete V domain amino acid sequences of two myeloma inulin-binding proteins. Johnson N, et al. J Immunol, 1982 Jan. PMID 6798111
    3. Characteristics of the immunoglobulin Vkappa genes, pseudogenes, relics and orphons in the mouse genome. Schäble KF, et al. Eur J Immunol, 1999 Jul. PMID 10427970
    4. IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Giudicelli V, et al. Nucleic Acids Res, 2005 Jan 1. PMID 15608191, Free PMC Article
    5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • immunoglobulin kappa chain variable 11-125
    • immunoglobulin light chain variable region

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of immunoglobulin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_005612.1 

      Range
      358593..359072
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      67890557..67891036
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P01650.1 GenPept UniProtKB/Swiss-Prot:P01650
    P01651.1 GenPept UniProtKB/Swiss-Prot:P01651

    Gene LinkOut

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