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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 1466526, updated on 9-Dec-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000028830
    Locus tag
    YHR007C-A
    See related
    AllianceGenome:SGD:S000028830; FungiDB:YHR007C-A; VEuPathDB:YHR007C-A
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (122550..122765, complement)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene Stp2p Neighboring gene sterol 14-demethylase Neighboring gene superoxide dismutase SOD2 Neighboring gene Tda3p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Parallel identification of new genes in Saccharomyces cerevisiae. Oshiro G, et al. Genome Res, 2002 Aug. PMID 12176929, Free PMC Article
    2. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. Johnston M, et al. Science, 1994 Sep 30. PMID 8091229
    3. Association of yeast Upf1p with direct substrates of the NMD pathway. Johansson MJ, et al. Proc Natl Acad Sci U S A, 2007 Dec 26. PMID 18087042, Free PMC Article
    4. One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Yofe I, et al. Nat Methods, 2016 Apr. PMID 26928762, Free PMC Article
    5. A novel translational control mechanism involving RNA structures within coding sequences. Jungfleisch J, et al. Genome Res, 2017 Jan. PMID 27821408, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_878086.1
    • hypothetical protein; identified by expression profiling and mass spectrometry; SWAT-GFP fusion protein localizes to the nucleus

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      122550..122765 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184651.1 → NP_878086.1  TPA: uncharacterized protein YHR007C-A [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_878086.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DKV2, Q07074
      UniProtKB/TrEMBL
      A6ZSR1, B3LSC8, C7GMQ4, C8ZA74
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q07074.2

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