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    CSS3 Css3p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854006, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CSS3
    Official Full Name
    Css3p
    Primary source
    SGD:S000005519
    Locus tag
    YOL159C
    See related
    AllianceGenome:SGD:S000005519; FungiDB:YOL159C; VEuPathDB:YOL159C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cell periphery and extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See CSS3 in Genome Data Viewer
    Location:
    chromosome: XV
    Exon count:
    1
    Sequence:
    Chromosome: XV; NC_001147.6 (17281..17796, complement)

    Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Enb1p Neighboring gene oligo-1,6-glucosidase IMA2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001147.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence-based approach for identification of cell wall proteins in Saccharomyces cerevisiae. Terashima H, et al. Curr Genet, 2002 Feb. PMID 11935221
    2. Functional genomics reveals relationships between the retrovirus-like Ty1 element and its host Saccharomyces cerevisiae. Griffith JL, et al. Genetics, 2003 Jul. PMID 12871900, Free PMC Article
    3. Reconstitution and protein composition analysis of endocytic actin patches. Michelot A, et al. Curr Biol, 2010 Nov 9. PMID 21035341, Free PMC Article
    4. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549
    5. J domain co-chaperone specificity defines the role of BiP during protein translocation. Vembar SS, et al. J Biol Chem, 2010 Jul 16. PMID 20430885, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cell periphery HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in extracellular region HDA PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Css3p
    NP_014483.1
    • hypothetical protein, secreted when constitutively expressed; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cell periphery, SWAT-GFP fusion also localizes to the extracellular region, and mCherry fusion also localizes to the vacuole; deletion mutants are viable and have elevated levels of Ty1 retrotransposition and Ty1 cDNA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001147.6 Reference assembly

      Range
      17281..17796 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183412.1 → NP_014483.1  TPA: Css3p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014483.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W1R1, Q08300
      UniProtKB/TrEMBL
      A6ZN51, N1P3Z5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q08300.1

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