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    msp-40 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [ Caenorhabditis elegans ]

    Gene ID: 173830, updated on 9-Dec-2024

    Summary

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    Official Symbol
    msp-40
    Official Full Name
    Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
    Primary source
    WormBase:WBGene00003435
    Locus tag
    CELE_C33F10.9
    See related
    AllianceGenome:WB:WBGene00003435
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in gonad; oocyte; and sperm. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See msp-40 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003280.10 (4825414..4825797)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Beta-lactamase-related domain-containing protein Neighboring gene Tyrosine-protein phosphatase domain-containing protein Neighboring gene F-box domain-containing protein Neighboring gene TBC domain-containing protein kinase-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic organization of major sperm protein genes and pseudogenes in the nematode Caenorhabditis elegans. Ward S, et al. J Mol Biol, 1988 Jan 5. PMID 3351915
    2. Functional transcriptomics of a migrating cell in Caenorhabditis elegans. Schwarz EM, et al. Proc Natl Acad Sci U S A, 2012 Oct 2. PMID 22991463, Free PMC Article
    3. Clustered organization of reproductive genes in the C. elegans genome. Miller MA, et al. Curr Biol, 2004 Jul 27. PMID 15268860
    4. Gamma radiation induces life stage-dependent reprotoxicity in Caenorhabditis elegans via impairment of spermatogenesis. Maremonti E, et al. Sci Total Environ, 2019 Dec 10. PMID 31425988
    5. Analysis of long-lived C. elegans daf-2 mutants using serial analysis of gene expression. Halaschek-Wiener J, et al. Genome Res, 2005 May. PMID 15837805, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
    NP_494865.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      4825414..4825797
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062464.8 → NP_494865.1  Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494865.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P53017
      Conserved Domains (1) summary
      pfam00635
      Location:9 → 114
      Motile_Sperm; MSP (Major sperm protein) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P53017.2

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