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    COX2 cytochrome c oxidase subunit II [ Caenorhabditis elegans ]

    Gene ID: 2565697, updated on 18-Sep-2024

    Summary

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    Gene symbol
    COX2
    Gene description
    cytochrome c oxidase subunit II
    Locus tag
    KEF34_p03
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Caenorhabditis elegans (strain: N2 Bristol., common: roundworm)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See COX2 in Genome Data Viewer
    Sequence:
    Chromosome: MT; NC_001328.1 (9649..10344)

    Chromosome MT - NC_001328.1Genomic Context describing neighboring genes Neighboring gene tRNA-Asp Neighboring gene tRNA-Gly Neighboring gene tRNA-His Neighboring gene l-rRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001328.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nucleotide correlations that suggest tertiary interactions in the TV-replacement loop-containing mitochondrial tRNAs of the nematodes, Caenorhabditis elegans and Ascaris suum. Wolstenholme DR, et al. Nucleic Acids Res, 1994 Oct 11. PMID 7937159, Free PMC Article
    2. Evidence for the frequent use of TTG as the translation initiation codon of mitochondrial protein genes in the nematodes, Ascaris suum and Caenorhabditis elegans. Okimoto R, et al. Nucleic Acids Res, 1990 Oct 25. PMID 2235493, Free PMC Article
    3. The mitochondrial genomes of two nematodes, Caenorhabditis elegans and Ascaris suum. Okimoto R, et al. Genetics, 1992 Mar. PMID 1551572, Free PMC Article
    4. A conserved heptamer motif for ribosomal RNA transcription termination in animal mitochondria. Valverde JR, et al. Proc Natl Acad Sci U S A, 1994 Jun 7. PMID 7515499, Free PMC Article
    5. CCAR-1 works together with the U2AF large subunit UAF-1 to regulate alternative splicing. Lugano DI, et al. RNA Biol, 2024 Jan. PMID 38126797, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

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    Preferred Names
    cytochrome c oxidase subunit II

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001328.1 Reference assembly

      Range
      9649..10344
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_006962.1 cytochrome c oxidase subunit II (mitochondrion) [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_006962.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P24894
      UniProtKB/TrEMBL
      G5EGS6
      Conserved Domains (3) summary
      MTH00080
      Location:3 → 231
      COX2; cytochrome c oxidase subunit II; Provisional
      cd13912
      Location:96 → 225
      CcO_II_C; C-terminal domain of Cytochrome c Oxidase subunit II
      pfam02790
      Location:8 → 85
      COX2_TM; Cytochrome C oxidase subunit II, transmembrane domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P24894.2

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