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    bam-2 Neurexin-related protein bam-2 [ Caenorhabditis elegans ]

    Gene ID: 171868, updated on 9-Dec-2024

    Summary

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    Official Symbol
    bam-2
    Official Full Name
    Neurexin-related protein bam-2
    Primary source
    WormBase:WBGene00000237
    Locus tag
    CELE_Y71F9AR.1
    See related
    AllianceGenome:WB:WBGene00000237
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in nervous system development. Located in plasma membrane. Is expressed in head neurons; somatic gonad; tail neurons; ventral cord neurons; and vulF. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See bam-2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    13
    Sequence:
    Chromosome: I; NC_003279.8 (2949601..2957910, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Conserved oligomeric Golgi complex subunit 3;Conserved oligomeric Golgi complex subunit 3 C-terminal domain-containing protein Neighboring gene ncRNA Neighboring gene Secreted protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multiple conserved cell adhesion protein interactions mediate neural wiring of a sensory circuit in C. elegans. Kim B, et al. Elife, 2017 Sep 13. PMID 28901288, Free PMC Article
    2. A Neurexin-related protein, BAM-2, terminates axonal branches in C. elegans. Colavita A, et al. Science, 2003 Oct 10. PMID 14551437
    3. The Pax2/5/8 gene egl-38 coordinates organogenesis of the C. elegans egg-laying system. Rajakumar V, et al. Dev Biol, 2007 Jan 1. PMID 17020758
    4. Function of cell adhesion molecules in differentiation of ray sensory neurons in C. elegans. Sakai N, et al. G3 (Bethesda), 2023 Mar 9. PMID 36573343, Free PMC Article
    5. Vulval development. Sternberg PW. WormBook, 2005 Jun 25. PMID 18050418, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Neurexin-related protein bam-2
    NP_001021809.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      2949601..2957910 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001026638.5 → NP_001021809.1  Neurexin-related protein bam-2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021809.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      G5ECL4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    G5ECL4.1

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