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    C25F9.2 DNA-directed DNA polymerase [ Caenorhabditis elegans ]

    Gene ID: 182904, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C25F9.2
    Official Full Name
    DNA-directed DNA polymerase
    Primary source
    WormBase:WBGene00007723
    Locus tag
    CELE_C25F9.2
    See related
    AllianceGenome:WB:WBGene00007723
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA binding activity; DNA-directed DNA polymerase activity; and nucleotide binding activity. Predicted to be involved in DNA biosynthetic process and DNA replication. Predicted to be part of DNA polymerase complex. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C25F9.2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    15
    Sequence:
    Chromosome: V; NC_003283.11 (19421471..19426774)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene HEPN domain-containing protein Neighboring gene ncRNA Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene tRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-directed DNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in DNA metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of DNA polymerase complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DNA-directed DNA polymerase
    NP_507780.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      19421471..19426774
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075379.4 → NP_507780.2  DNA-directed DNA polymerase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507780.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O62074
      Conserved Domains (3) summary
      smart00486
      Location:1237 → 1372
      POLBc; DNA polymerase type-B family
      cl22851
      Location:484 → 522
      PHD_SF; PHD finger superfamily
      cl28058
      Location:707 → 1282
      DNA_pol_B_2; DNA polymerase type B, organellar and viral
    Nucleotide Protein
    Heading Accession and Version

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