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    sup-37 C2H2-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179257, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sup-37
    Official Full Name
    C2H2-type domain-containing protein
    Primary source
    WormBase:WBGene00006342
    Locus tag
    CELE_C01B7.1
    See related
    AllianceGenome:WB:WBGene00006342
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in embryonic digestive tract morphogenesis. Located in nucleus. Is expressed in neurons; pharynx; and spermatheca. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sup-37 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    10
    Sequence:
    Chromosome: V; NC_003283.11 (8786545..8792776)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene MAGUK p55 subfamily member 5 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A regulatory module controlling pharyngeal development and function in Caenorhabditis elegans. Fay DS, et al. Genetics, 2012 Jul. PMID 22542967, Free PMC Article
    2. Identification of muscle-specific regulatory modules in Caenorhabditis elegans. Zhao G, et al. Genome Res, 2007 Mar. PMID 17284674, Free PMC Article
    3. Implicating SCF complexes in organogenesis in Caenorhabditis elegans. Polley SR, et al. Genetics, 2014 Jan. PMID 24214340, Free PMC Article
    4. Suppressors of the organ-specific differentiation gene pha-1 of Caenorhabditis elegans. Schnabel H, et al. Genetics, 1991 Sep. PMID 1657704, Free PMC Article
    5. ARI-1, an RBR family ubiquitin-ligase, functions with UBC-18 to regulate pharyngeal development in C. elegans. Qiu X, et al. Dev Biol, 2006 Mar 15. PMID 16457801

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. SUP-37/ZTF-12 as an additional component of the PHA-1 network regulating pharyngeal development
      Title: A regulatory module controlling pharyngeal development and function in Caenorhabditis elegans.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in embryonic digestive tract morphogenesis IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C2H2-type domain-containing protein
    NP_001256110.1
    • Confirmed by transcript evidence
    NP_001368145.1
    • Confirmed by transcript evidence
    NP_001370344.1
    • Confirmed by transcript evidence
    NP_741578.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      8786545..8792776
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269181.4 → NP_001256110.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256110.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KYB3

    2. NM_001383359.1 → NP_001370344.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MNV9

    3. NM_171493.8 → NP_741578.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741578.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KYB2

    4. NM_001380714.1 → NP_001368145.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      I7K4K0
    Nucleotide Protein
    Heading Accession and Version

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