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    clec-51 C-type lectin domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181854, updated on 9-Dec-2024

    Summary

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    Official Symbol
    clec-51
    Official Full Name
    C-type lectin domain-containing protein
    Primary source
    WormBase:WBGene00015050
    Locus tag
    CELE_B0218.6
    See related
    AllianceGenome:WB:WBGene00015050
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable signaling receptor activity. Orthologous to several human genes including LY75-CD302 (LY75-CD302 readthrough); LY75 (lymphocyte antigen 75); and MRC2 (mannose receptor C-type 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See clec-51 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    7
    Sequence:
    Chromosome: IV; NC_003282.8 (8161953..8163800, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Protein kinase domain-containing protein Neighboring gene ncRNA Neighboring gene Fatty acid amide hydrolase 1 Neighboring gene Ovule protein Neighboring gene C-type lectin domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A C-type lectin of Caenorhabditis elegans: its sugar-binding property revealed by glycoconjugate microarray analysis. Takeuchi T, et al. Biochem Biophys Res Commun, 2008 Dec 5. PMID 18848522
    2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    C-type lectin domain-containing protein
    NP_001368439.1
    • Confirmed by transcript evidence
    NP_501369.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      8161953..8163800 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068968.7 → NP_501369.1  C-type lectin domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501369.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17450
      Conserved Domains (2) summary
      cd00037
      Location:32 → 149
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
      smart00034
      Location:166 → 303
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)

    2. NM_001380354.1 → NP_001368439.1  C-type lectin domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      W6RTE8
      Conserved Domains (1) summary
      smart00034
      Location:42 → 179
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    Nucleotide Protein
    Heading Accession and Version

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