U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    F37C4.5 Protein F37C4.5 [ Caenorhabditis elegans ]

    Gene ID: 177146, updated on 2-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    F37C4.5
    Official Full Name
    Protein F37C4.5
    Primary source
    WormBase:WBGene00018145
    Locus tag
    CELE_F37C4.5
    See related
    AllianceGenome:WB:WBGene00018145
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in mitochondrion. [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See F37C4.5 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (3871831..3873806, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Zinc finger E-box-binding homeobox protein zag-1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Amino acid transporter Neighboring gene MARVEL domain-containing protein;Transmembrane protein 196 Neighboring gene Amino_oxidase domain-containing protein;Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 Neighboring gene YkgJ family cysteine cluster protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A conserved CCM complex promotes apoptosis non-autonomously by regulating zinc homeostasis. Chapman EM, et al. Nat Commun, 2019 Apr 17. PMID 30996251, Free PMC Article
    2. The demethylase NMAD-1 regulates DNA replication and repair in the Caenorhabditis elegans germline. Wang SY, et al. PLoS Genet, 2019 Jul. PMID 31283754, Free PMC Article
    3. Ribosomal protein RPS-14 modulates let-7 microRNA function in Caenorhabditis elegans. Chan SP, et al. Dev Biol, 2009 Oct 1. PMID 19627982, Free PMC Article
    4. SUMO peptidase ULP-4 regulates mitochondrial UPR-mediated innate immunity and lifespan extension. Gao K, et al. Elife, 2019 Jan 15. PMID 30642431, Free PMC Article
    5. CCAR-1 works together with the U2AF large subunit UAF-1 to regulate alternative splicing. Lugano DI, et al. RNA Biol, 2024 Jan. PMID 38126797, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Protein F37C4.5
    NP_001023185.1
    • Confirmed by transcript evidence
    NP_001367794.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      3871831..3873806 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001028014.5 → NP_001023185.1  Protein F37C4.5 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001023185.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O44400, Q86MF4
      Conserved Domains (1) summary
      TIGR02231
      Location:16 → 550
      TIGR02231; conserved hypothetical protein

    2. NM_001380170.1 → NP_001367794.1  Protein F37C4.5 [Caenorhabditis elegans]

      Status: REVIEWED

      Conserved Domains (1) summary
      pfam13598
      Location:1 → 306
      DUF4139; Domain of unknown function (DUF4139)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O44400.3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools