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    idpp-2 Intrinsically Disordered Protein, expressed in Pharynx [ Caenorhabditis elegans ]

    Gene ID: 181937, updated on 18-Sep-2024

    Summary

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    Official Symbol
    idpp-2
    Official Full Name
    Intrinsically Disordered Protein, expressed in Pharynx
    Primary source
    WormBase:WBGene00015153
    Locus tag
    CELE_B0348.5
    See related
    AllianceGenome:WB:WBGene00015153
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See idpp-2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (1635..6634)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Eukaryotic translation initiation factor 4E-3 Neighboring gene Secreted protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A spatiotemporal reconstruction of the C. elegans pharyngeal cuticle reveals a structure rich in phase-separating proteins. Kamal M, et al. Elife, 2022 Oct 19. PMID 36259463, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Intrinsically Disordered Protein, expressed in Pharynx
    NP_001300036.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class idpp
    NP_001368549.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class idpp

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      1635..6634
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001380574.2 → NP_001368549.1  Intrinsically Disordered Protein, expressed in Pharynx [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AV61

    2. NM_001313107.4 → NP_001300036.1  Intrinsically Disordered Protein, expressed in Pharynx [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AUN6
    Nucleotide Protein
    Heading Accession and Version

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