H18N23.2 Protein phosphatase 1 regulatory subunit [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: H18N23.2
Official Full Name: Protein phosphatase 1 regulatory subunit
Primary source: WormBase:WBGene00019211
Locus tag: CELE_H18N23.2
See related: AllianceGenome:WB:WBGene00019211
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable glycogen binding activity and protein phosphatase 1 binding activity. Predicted to be involved in regulation of glycogen biosynthetic process. Predicted to be part of protein phosphatase type 1 complex. Orthologous to several human genes including PPP1R3B (protein phosphatase 1 regulatory subunit 3B). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See H18N23.2 in Genome Data Viewer

Location:: chromosome: X

Exon count:: 8

Sequence:: Chromosome: X; NC_003284.9 (17622710..17640871, complement)

Chromosome X - NC_003284.9 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

H18N23.a (e-PCR)
- UniSTS:323564

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables glycogen binding	IBA Inferred from Biological aspect of Ancestor more info
enables protein phosphatase 1 binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in glycogen metabolic process	IEA Inferred from Electronic Annotation more info
involved_in regulation of glycogen biosynthetic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of protein phosphatase type 1 complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Protein phosphatase 1 regulatory subunit

NP_001359868.1

Confirmed by transcript evidence

NP_001359869.1

Confirmed by transcript evidence

NP_741955.2

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003284.9 Reference assembly

Range

17622710..17640871 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001373635.2 → NP_001359868.1 Protein phosphatase 1 regulatory subunit [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

G5EE64

Conserved Domains (1) summary

pfam03370
Location:185 → 290

CBM_21; Carbohydrate/starch-binding module (family 21)
NM_001373634.3 → NP_001359869.1 Protein phosphatase 1 regulatory subunit [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

Q400N3

Conserved Domains (1) summary

pfam03370
Location:195 → 300

CBM_21; Carbohydrate/starch-binding module (family 21)
NM_171822.6 → NP_741955.2 Protein phosphatase 1 regulatory subunit [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_741955.2

Status: REVIEWED

UniProtKB/TrEMBL

H2KYT5

Conserved Domains (1) summary

pfam03370
Location:209 → 314

CBM_21; Carbohydrate/starch-binding module (family 21)