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    clec-205 C-type lectin domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178657, updated on 28-Oct-2024

    Summary

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    Official Symbol
    clec-205
    Official Full Name
    C-type lectin domain-containing protein
    Primary source
    WormBase:WBGene00021602
    Locus tag
    CELE_Y46H3B.1
    See related
    AllianceGenome:WB:WBGene00021602
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See clec-205 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    11
    Sequence:
    Chromosome: V; NC_003283.11 (1760893..1765305)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene DeHydrogenases, Short chain Neighboring gene C-type lectin domain-containing protein Neighboring gene DeHydrogenases, Short chain Neighboring gene UPAR/Ly6 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Specificity of the innate immune system and diversity of C-type lectin domain (CTLD) proteins in the nematode Caenorhabditis elegans. Schulenburg H, et al. Immunobiology, 2008. PMID 18406370
    2. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    C-type lectin domain-containing protein
    NP_001300254.1
    • Confirmed by transcript evidence
    NP_503500.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      1760893..1765305
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071099.7 → NP_503500.2  C-type lectin domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503500.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N4W4
      Conserved Domains (2) summary
      cd00037
      Location:432 → 552
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
      cl02432
      Location:77 → 156
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    2. NM_001313325.3 → NP_001300254.1  C-type lectin domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AYB0
      Conserved Domains (1) summary
      cd00037
      Location:60 → 180
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    Nucleotide Protein
    Heading Accession and Version

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