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    H11E01.3 Serine-rich adhesin for platelets;Serine/arginine repetitive matrix protein 2 [ Caenorhabditis elegans ]

    Gene ID: 180495, updated on 18-Sep-2024

    Summary

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    Official Symbol
    H11E01.3
    Official Full Name
    Serine-rich adhesin for platelets;Serine/arginine repetitive matrix protein 2
    Primary source
    WormBase:WBGene00019188
    Locus tag
    CELE_H11E01.3
    See related
    AllianceGenome:WB:WBGene00019188
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See H11E01.3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    12
    Sequence:
    Chromosome: X; NC_003284.9 (1604906..1619151)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene WaRThog (hedgehog-like family) Neighboring gene tRNA-Ile Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene tRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Serine-rich adhesin for platelets;Serine/arginine repetitive matrix protein 2
    NP_001368766.1
    • Confirmed by transcript evidence
    NP_001368767.1
    • Confirmed by transcript evidence
    NP_001368771.1
    • Confirmed by transcript evidence
    NP_001380258.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      1604906..1619151
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001380918.3 → NP_001368771.1  Serine/arginine repetitive matrix protein 2 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5E4LWT0
      Conserved Domains (2) summary
      COG5422
      Location:703 → 919
      ROM1; RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
      PRK14949
      Location:331 → 667
      PRK14949; DNA polymerase III subunits gamma and tau; Provisional

    2. NM_001380915.1 → NP_001368767.1  Serine-rich adhesin for platelets [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5E4LZG5
      Conserved Domains (2) summary
      COG5422
      Location:775 → 991
      ROM1; RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
      PRK14949
      Location:403 → 739
      PRK14949; DNA polymerase III subunits gamma and tau; Provisional

    3. NM_001380916.1 → NP_001368766.1  Serine-rich adhesin for platelets [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5E4M3B1
      Conserved Domains (2) summary
      COG5422
      Location:756 → 972
      ROM1; RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
      PRK14949
      Location:384 → 720
      PRK14949; DNA polymerase III subunits gamma and tau; Provisional

    4. NM_001392730.1 → NP_001380258.1  Serine/arginine repetitive matrix protein 2 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5E4LWF5
      Conserved Domains (2) summary
      COG5422
      Location:722 → 938
      ROM1; RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
      PRK14949
      Location:350 → 686
      PRK14949; DNA polymerase III subunits gamma and tau; Provisional
    Nucleotide Protein
    Heading Accession and Version

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