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    aat-8 Amino acid transporter [ Caenorhabditis elegans ]

    Gene ID: 185079, updated on 2-Nov-2024

    Summary

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    Official Symbol
    aat-8
    Official Full Name
    Amino acid transporter
    Primary source
    WormBase:WBGene00000009
    Locus tag
    CELE_F28F9.4
    See related
    AllianceGenome:WB:WBGene00000009
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable L-amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See aat-8 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    10
    Sequence:
    Chromosome: IV; NC_003282.8 (3862033..3865044, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Zinc finger E-box-binding homeobox protein zag-1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene MARVEL domain-containing protein;Transmembrane protein 196 Neighboring gene Protein F37C4.5 Neighboring gene Amino_oxidase domain-containing protein;Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional characterization of Caenorhabditis elegans heteromeric amino acid transporters. Veljkovic E, et al. J Biol Chem, 2004 Feb 27. PMID 14668347
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables L-amino acid transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in L-alpha-amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in amino acid transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Amino acid transporter
    NP_500425.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      3862033..3865044 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068024.3 → NP_500425.2  Amino acid transporter [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500425.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q94197
      Conserved Domains (2) summary
      pfam13520
      Location:9 → 438
      AA_permease_2; Amino acid permease
      cl00337
      Location:241 → 324
      PT_UbiA; UbiA family of prenyltransferases (PTases)
    Nucleotide Protein
    Heading Accession and Version

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