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    nhx-5 Sodium/hydrogen exchanger [ Caenorhabditis elegans ]

    Gene ID: 181258, updated on 9-Dec-2024

    Summary

    Official Symbol
    nhx-5
    Official Full Name
    Sodium/hydrogen exchanger
    Primary source
    WormBase:WBGene00003733
    Locus tag
    CELE_F57C7.2
    See related
    AllianceGenome:WB:WBGene00003733
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable potassium:proton antiporter activity and sodium:proton antiporter activity. Predicted to be involved in potassium ion transmembrane transport; regulation of intracellular pH; and sodium ion import across plasma membrane. Predicted to be located in recycling endosome membrane. Predicted to be active in plasma membrane and recycling endosome. Is expressed in several structures, including HSN; excretory cell; ganglia; ventral nerve cord; and vulC. Human ortholog(s) of this gene implicated in Christianson syndrome; X-linked intellectual developmental disorder 108; and autistic disorder. Orthologous to several human genes including SLC9A9 (solute carrier family 9 member A9). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See nhx-5 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    19
    Sequence:
    Chromosome: X; NC_003284.9 (10576960..10581034)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene DM13 domain-containing protein Neighboring gene Bromo domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene PKD/REJ-like domain-containing protein Neighboring gene ncRNA Neighboring gene Syndecan;putative syndecan Neighboring gene ncRNA

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables potassium:proton antiporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sodium:proton antiporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sodium:proton antiporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in monoatomic cation transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in potassium ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of intracellular pH IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of intracellular pH IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of pH IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sodium ion import across plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in recycling endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in recycling endosome membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Sodium/hydrogen exchanger
    NP_001024720.1
    • Confirmed by transcript evidence
    NP_001359642.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      10576960..10581034
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373485.3NP_001359642.1  Sodium/hydrogen exchanger [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5ECW8
      Conserved Domains (1) summary
      TIGR00840
      Location:157469
      b_cpa1; sodium/hydrogen exchanger 3
    2. NM_001029549.5NP_001024720.1  Sodium/hydrogen exchanger [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024720.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5ED88
      Conserved Domains (1) summary
      COG0025
      Location:152470
      NhaP; NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism]