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    sptf-2 Specificity protein transcription factor 2 [ Caenorhabditis elegans ]

    Gene ID: 188733, updated on 9-Dec-2024

    Summary

    Official Symbol
    sptf-2
    Official Full Name
    Specificity protein transcription factor 2
    Primary source
    WormBase:WBGene00011926
    Locus tag
    CELE_T22C8.5
    See related
    AllianceGenome:WB:WBGene00011926
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in canonical Wnt signaling pathway. Is expressed in head neurons and intestine. Orthologous to human SP5 (Sp5 transcription factor). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See sptf-2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (8625459..8627622)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene C2H2-type domain-containing protein Neighboring gene C2H2-type domain-containing protein Neighboring gene Ntox44 domain-containing protein Neighboring gene ZP domain-containing protein Neighboring gene tRNA-Leu Neighboring gene ncRNA Neighboring gene Transmembrane protein 47

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    Specificity protein transcription factor 2
    NP_495833.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      8625459..8627622
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063432.2NP_495833.1  Specificity protein transcription factor 2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495833.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q22678
      Conserved Domains (2) summary
      COG5048
      Location:75156
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:82101
      ZF_C2H2; C2H2 Zn finger [structural motif]