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    Y48A6B.7 CMP/dCMP-type deaminase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176533, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y48A6B.7
    Official Full Name
    CMP/dCMP-type deaminase domain-containing protein
    Primary source
    WormBase:WBGene00012968
    Locus tag
    CELE_Y48A6B.7
    See related
    AllianceGenome:WB:WBGene00012968
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable guanosine deaminase activity. Predicted to be involved in purine nucleoside catabolic process. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y48A6B.7 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003281.10 (11025239..11026566, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein;putative voltage-gated potassium channel subunit kvs-4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Wsv161 Neighboring gene NR LBD domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables guanosine deaminase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in purine nucleoside catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    CMP/dCMP-type deaminase domain-containing protein
    NP_499418.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      11025239..11026566 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067017.6 → NP_499418.1  CMP/dCMP-type deaminase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499418.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XXD0
      Conserved Domains (1) summary
      cd01285
      Location:18 → 126
      nucleoside_deaminase; Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn dependent and catalyze the deamination of nucleosides. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a ...
    Nucleotide Protein
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